Information for 17-GAGCARGGGCCYG (Motif 19)

A T C G C G T A T A C G T A G C G T C A C T A G C T A G T A C G A T C G A G T C G T A C G A C T A T C G
Reverse Opposite:
T A G C C T G A A C T G A C T G A T G C A T G C A G T C A G T C C A G T A T C G A G T C G C A T A T G C
p-value:1e-9
log p-value:-2.213e+01
Information Content per bp:1.678
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif7.2
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets64.4 +/- 19.0bp
Average Position of motif in Background43.4 +/- 30.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GAGCARGGGCCYG
SDGCAGGTGCNS-
 A T C G C G T A T A C G T A G C G T C A C T A G C T A G T A C G A T C G A G T C G T A C G A C T A T C G
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T

Zfx/MA0146.2/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GAGCARGGGCCYG
GGGGCCGAGGCCTG
 A C G T A T C G C G T A T A C G T A G C G T C A C T A G C T A G T A C G A T C G A G T C G T A C G A C T A T C G
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

NRF1/MA0506.1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GAGCARGGGCCYG
TGCGCAGGCGC---
 A C G T A T C G C G T A T A C G T A G C G T C A C T A G C T A G T A C G A T C G A G T C G T A C G A C T A T C G
A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C A C G T A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GAGCARGGGCCYG
AGAGTCCAAAGTCCA-
 A C G T A C G T A C G T A T C G C G T A T A C G T A G C G T C A C T A G C T A G T A C G A T C G A G T C G T A C G A C T A T C G
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.58
Offset:6
Orientation:forward strand
Alignment:GAGCARGGGCCYG-
------AGGCCTNG
 A T C G C G T A T A C G T A G C G T C A C T A G C T A G T A C G A T C G A G T C G T A C G A C T A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GAGCARGGGCCYG
CTGCGCATGCGC---
 A C G T A C G T A T C G C G T A T A C G T A G C G T C A C T A G C T A G T A C G A T C G A G T C G T A C G A C T A T C G
A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:7
Score:0.57
Offset:6
Orientation:forward strand
Alignment:GAGCARGGGCCYG-
------AGGCCTAG
 A T C G C G T A T A C G T A G C G T C A C T A G C T A G T A C G A T C G A G T C G T A C G A C T A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

NRF(NRF)/Promoter/Homer

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GAGCARGGGCCYG
GTGCGCATGCGC---
 A C G T A C G T A T C G C G T A T A C G T A G C G T C A C T A G C T A G T A C G A T C G A G T C G T A C G A C T A T C G
A T C G A G C T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C A C G T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GAGCARGGGCCYG
TAGGGCAAAGGTCA-
 A C G T A C G T A T C G C G T A T A C G T A G C G T C A C T A G C T A G T A C G A T C G A G T C G T A C G A C T A T C G
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T

PB0047.1_Myf6_1/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GAGCARGGGCCYG
GAAGAACAGGTGTCCG
 A C G T A C G T A C G T A T C G C G T A T A C G T A G C G T C A C T A G C T A G T A C G A T C G A G T C G T A C G A C T A T C G
T C A G T C G A C T G A A T C G T C G A C T G A A G T C C G T A A T C G A C T G G A C T A C T G A C G T A G T C G A T C A C T G