Information for 6-TRTTAAACATTTA (Motif 9)

A C G T C T A G A C G T A G C T C G T A C G T A C G T A A G T C C G T A A C G T A C G T A G C T C G T A
Reverse Opposite:
C G A T C T G A C G T A C G T A A C G T A C T G A C G T A C G T A C G T C T G A G T C A A G C T C G T A
p-value:1e-11
log p-value:-2.664e+01
Information Content per bp:1.880
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets66.9 +/- 24.7bp
Average Position of motif in Background62.7 +/- 19.0bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:1
Score:0.77
Offset:0
Orientation:forward strand
Alignment:TRTTAAACATTTA
GGTTAAACATTAA
 A C G T C T A G A C G T A G C T C G T A C G T A C G T A A G T C C G T A A C G T A C G T A G C T C G T A
C T A G C T A G G C A T C G A T C T G A G T C A G C T A A T G C C G T A C A G T G A C T C G T A T G C A

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:2
Score:0.69
Offset:1
Orientation:forward strand
Alignment:TRTTAAACATTTA
-GTTAATNATTAA
 A C G T C T A G A C G T A G C T C G T A C G T A C G T A A G T C C G T A A C G T A C G T A G C T C G T A
A C G T C T A G A C G T G C A T T C G A G T C A G C A T A T C G C G T A C A G T A G C T C T G A T G C A

FOXD1/MA0031.1/Jaspar

Match Rank:3
Score:0.67
Offset:2
Orientation:forward strand
Alignment:TRTTAAACATTTA
--GTAAACAT---
 A C G T C T A G A C G T A G C T C G T A C G T A C G T A A G T C C G T A A C G T A C G T A G C T C G T A
A C G T A C G T A C T G A C G T G T C A C G T A T C G A G A T C C G T A C G A T A C G T A C G T A C G T

HNF1A/MA0046.2/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TRTTAAACATTTA--
NGTTAATNATTAACN
 A C G T C T A G A C G T A G C T C G T A C G T A C G T A A G T C C G T A A C G T A C G T A G C T C G T A A C G T A C G T
C G T A C A T G A G C T G C A T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G A T C G A C T

Foxq1/MA0040.1/Jaspar

Match Rank:5
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TRTTAAACATTTA
-AATAAACAATN-
 A C G T C T A G A C G T A G C T C G T A C G T A C G T A A G T C C G T A A C G T A C G T A G C T C G T A
A C G T G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A A C G T

FOXG1/MA0613.1/Jaspar

Match Rank:6
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TRTTAAACATTTA
--GTAAACAA---
 A C G T C T A G A C G T A G C T C G T A C G T A C G T A A G T C C G T A A C G T A C G T A G C T C G T A
A C G T A C G T C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A A C G T A C G T A C G T

HNF1B/MA0153.2/Jaspar

Match Rank:7
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TRTTAAACATTTA-
-GTTAATNATTAAC
 A C G T C T A G A C G T A G C T C G T A C G T A C G T A A G T C C G T A A C G T A C G T A G C T C G T A A C G T
A C G T C T A G A G C T G A C T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G T A C

FOXL1/MA0033.2/Jaspar

Match Rank:8
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TRTTAAACATTTA
--GTAAACA----
 A C G T C T A G A C G T A G C T C G T A C G T A C G T A A G T C C G T A A C G T A C G T A G C T C G T A
A C G T A C G T C T A G G A C T T G C A G T C A T G C A A G T C G T C A A C G T A C G T A C G T A C G T

FOXO3/MA0157.2/Jaspar

Match Rank:9
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TRTTAAACATTTA
--GTAAACAA---
 A C G T C T A G A C G T A G C T C G T A C G T A C G T A A G T C C G T A A C G T A C G T A G C T C G T A
A C G T A C G T C T A G A C G T T G C A G T C A G T C A G T A C G T C A C G T A A C G T A C G T A C G T

FOXD2/MA0847.1/Jaspar

Match Rank:10
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TRTTAAACATTTA
--GTAAACA----
 A C G T C T A G A C G T A G C T C G T A C G T A C G T A A G T C C G T A A C G T A C G T A G C T C G T A
A C G T A C G T T C A G G A C T G T C A G T C A C G T A A G T C C T G A A C G T A C G T A C G T A C G T