Information for 5-GAGGAATGCC (Motif 4)

A T C G T G C A C T A G T A C G T G C A T C G A C G A T C A T G A G T C G T A C
Reverse Opposite:
C A T G T C A G G T A C G C T A A G C T A C G T A T G C G A T C A C G T T A G C
p-value:1e-15
log p-value:-3.513e+01
Information Content per bp:1.659
Number of Target Sequences with motif54.0
Percentage of Target Sequences with motif6.33%
Number of Background Sequences with motif814.0
Percentage of Background Sequences with motif1.70%
Average Position of motif in Targets57.2 +/- 26.9bp
Average Position of motif in Background49.6 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:1
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-GAGGAATGCC
CCWGGAATGY-
 A C G T A T C G T G C A C T A G T A C G T G C A T C G A C G A T C A T G A G T C G T A C
T A G C T A G C G C A T C A T G A C T G G C T A C G T A A C G T A C T G G A T C A C G T

TEAD3/MA0808.1/Jaspar

Match Rank:2
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:GAGGAATGCC
-TGGAATGT-
 A T C G T G C A C T A G T A C G T G C A T C G A C G A T C A T G A G T C G T A C
A C G T G C A T C T A G A C T G G C T A C G T A A C G T A C T G G A C T A C G T

TEAD4/MA0809.1/Jaspar

Match Rank:3
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:GAGGAATGCC
NTGGAATGTN
 A T C G T G C A C T A G T A C G T G C A T C G A C G A T C A T G A G T C G T A C
C T G A G C A T C T A G T C A G G C T A C G T A G C A T A C T G G A C T A C T G

TEAD1/MA0090.2/Jaspar

Match Rank:4
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:GAGGAATGCC
NTGGAATGTG
 A T C G T G C A C T A G T A C G T G C A T C G A C G A T C A T G A G T C G T A C
C T G A G C A T T C A G C A T G C G T A T C G A C A G T A C T G A G C T C T A G

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-GAGGAATGCC
NCTGGAATGC-
 A C G T A T C G T G C A C T A G T A C G T G C A T C G A C G A T C A T G A G T C G T A C
G A T C G T A C C G A T A C T G A C T G C G T A C G T A A C G T A C T G G A T C A C G T

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:6
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-GAGGAATGCC
CCWGGAATGY-
 A C G T A T C G T G C A C T A G T A C G T G C A T C G A C G A T C A T G A G T C G T A C
A T G C G A T C C G A T C T A G A C T G G C T A C G T A A G C T A C T G A G C T A C G T

REL/MA0101.1/Jaspar

Match Rank:7
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:GAGGAATGCC--
--GGAAANCCCC
 A T C G T G C A C T A G T A C G T G C A T C G A C G A T C A T G A G T C G T A C A C G T A C G T
A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

SPIB/MA0081.1/Jaspar

Match Rank:8
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GAGGAATGCC
AGAGGAA----
 A C G T A T C G T G C A C T A G T A C G T G C A T C G A C G A T C A T G A G T C G T A C
C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:9
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GAGGAATGCC-
GGGGGAATCCCC
 A C G T A T C G T G C A C T A G T A C G T G C A T C G A C G A T C A T G A G T C G T A C A C G T
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C

HIC2/MA0738.1/Jaspar

Match Rank:10
Score:0.62
Offset:5
Orientation:forward strand
Alignment:GAGGAATGCC----
-----ATGCCCACC
 A T C G T G C A C T A G T A C G T G C A T C G A C G A T C A T G A G T C G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C