Information for 4-TAAACAAACA (Motif 3)

G C A T T C G A C T G A T C G A G A T C G T C A T G C A T G C A G A T C G T C A
Reverse Opposite:
C A G T C T A G A C G T A C G T C A G T C T A G A G C T G A C T A G C T C G T A
p-value:1e-18
log p-value:-4.353e+01
Information Content per bp:1.654
Number of Target Sequences with motif77.0
Percentage of Target Sequences with motif9.03%
Number of Background Sequences with motif1293.1
Percentage of Background Sequences with motif2.70%
Average Position of motif in Targets52.2 +/- 22.0bp
Average Position of motif in Background49.3 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0005.1_Forkhead_class/Jaspar

Match Rank:1
Score:0.89
Offset:1
Orientation:reverse strand
Alignment:TAAACAAACA
-AAATAAACA
 G C A T T C G A C T G A T C G A G A T C G T C A T G C A T G C A G A T C G T C A
A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:2
Score:0.85
Offset:0
Orientation:reverse strand
Alignment:TAAACAAACA
WAAGTAAAYA
 G C A T T C G A C T G A T C G A G A T C G T C A T G C A T G C A G A T C G T C A
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A

Foxd3/MA0041.1/Jaspar

Match Rank:3
Score:0.85
Offset:1
Orientation:reverse strand
Alignment:TAAACAAACA---
-AAACAAACATTC
 G C A T T C G A C T G A T C G A G A T C G T C A T G C A T G C A G A T C G T C A A C G T A C G T A C G T
A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.84
Offset:0
Orientation:forward strand
Alignment:TAAACAAACA
AAAGTAAACA
 G C A T T C G A C T G A T C G A G A T C G T C A T G C A T G C A G A T C G T C A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:5
Score:0.84
Offset:0
Orientation:forward strand
Alignment:TAAACAAACA
AAAGTAAACA
 G C A T T C G A C T G A T C G A G A T C G T C A T G C A T G C A G A T C G T C A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

FOXC2/MA0846.1/Jaspar

Match Rank:6
Score:0.84
Offset:0
Orientation:forward strand
Alignment:TAAACAAACA--
TAAGTAAACAAA
 G C A T T C G A C T G A T C G A G A T C G T C A T G C A T G C A G A T C G T C A A C G T A C G T
G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:7
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-TAAACAAACA-
WWATRTAAACAN
 A C G T G C A T T C G A C T G A T C G A G A T C G T C A T G C A T G C A G A T C G T C A A C G T
G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A

FOXA1/MA0148.3/Jaspar

Match Rank:8
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-TAAACAAACA----
CAAAGTAAACANNNN
 A C G T G C A T T C G A C T G A T C G A G A T C G T C A T G C A T G C A G A T C G T C A A C G T A C G T A C G T A C G T
G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:9
Score:0.78
Offset:0
Orientation:forward strand
Alignment:TAAACAAACA--
WWTRTAAACAVG
 G C A T T C G A C T G A T C G A G A T C G T C A T G C A T G C A G A T C G T C A A C G T A C G T
C G T A G C T A C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A T G C A T A C G

PB0016.1_Foxj1_1/Jaspar

Match Rank:10
Score:0.78
Offset:-4
Orientation:forward strand
Alignment:----TAAACAAACA--
AAAGTAAACAAAAATT
 A C G T A C G T A C G T A C G T G C A T T C G A C T G A T C G A G A T C G T C A T G C A T G C A G A T C G T C A A C G T A C G T
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T