Information for 12-GCCATGCTTG (Motif 23)

A C T G A T G C A G T C G T C A C G A T A T C G A T G C A C G T C G A T A T C G
Reverse Opposite:
A T G C G C T A C G T A T A C G T A G C G C T A A C G T A C T G A T C G G T A C
p-value:1e-7
log p-value:-1.683e+01
Information Content per bp:1.834
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.99%
Number of Background Sequences with motif180.4
Percentage of Background Sequences with motif0.38%
Average Position of motif in Targets38.9 +/- 29.0bp
Average Position of motif in Background50.7 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GCCATGCTTG-----
NGTCACGCTTGGCTGC
 A C G T A C T G A T G C A G T C G T C A C G A T A T C G A T G C A C G T C G A T A T C G A C G T A C G T A C G T A C G T A C G T
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GCCATGCTTG-----
GTCATGCHTGRCTGS
 A C T G A T G C A G T C G T C A C G A T A T C G A T G C A C G T C G A T A T C G A C G T A C G T A C G T A C G T A C G T
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

YY1/MA0095.2/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GCCATGCTTG
GCNGCCATCTTG-
 A C G T A C G T A C G T A C T G A T G C A G T C G T C A C G A T A T C G A T G C A C G T C G A T A T C G
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:4
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GCCATGCTTG
--CAAGCTT-
 A C T G A T G C A G T C G T C A C G A T A T C G A T G C A C G T C G A T A T C G
A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GCCATGCTTG
CGTGCCAAG----
 A C G T A C G T A C G T A C T G A T G C A G T C G T C A C G A T A T C G A T G C A C G T C G A T A T C G
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCCATGCTTG
TGCCAA-----
 A C G T A C T G A T G C A G T C G T C A C G A T A T C G A T G C A C G T C G A T A T C G
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GCCATGCTTG
GCCGCCATCTTG-
 A C G T A C G T A C G T A C T G A T G C A G T C G T C A C G A T A T C G A T G C A C G T C G A T A T C G
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T

PAX5/MA0014.2/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GCCATGCTTG---------
GTCACGCTTGGCTGCNCNN
 A C T G A T G C A G T C G T C A C G A T A T C G A T G C A C G T C G A T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A T G G A C T A G T C G T C A G A T C T C A G T A G C G A C T A G C T A T C G T C A G A T G C G A C T C T A G T G A C G A T C A G T C G C A T A G T C

PAX1/MA0779.1/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GCCATGCTTG------
CGTCACGCATGACTGCA
 A C G T A C T G A T G C A G T C G T C A C G A T A T C G A T G C A C G T C G A T A T C G A C G T A C G T A C G T A C G T A C G T A C G T
A T G C C A T G G C A T G A T C T G C A G A T C C A T G A T G C G C T A G A C T A T C G T C G A T A G C G A C T C A T G T G A C G T C A

YY2/MA0748.1/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GCCATGCTTG
GTCCGCCATTA---
 A C G T A C G T A C G T A C G T A C T G A T G C A G T C G T C A C G A T A T C G A T G C A C G T C G A T A T C G
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T A C G T A C G T