Information for 11-ACAGTTACGC (Motif 21)

C G T A A G T C C G T A A C T G A C G T A G C T C G T A A G T C C T A G A G T C
Reverse Opposite:
A C T G A G T C C T A G A C G T T C G A C G T A A G T C A C G T T A C G A C G T
p-value:1e-8
log p-value:-2.053e+01
Information Content per bp:1.866
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif25.3
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets46.0 +/- 25.8bp
Average Position of motif in Background50.4 +/- 34.4bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax2/MA0067.1/Jaspar

Match Rank:1
Score:0.61
Offset:2
Orientation:forward strand
Alignment:ACAGTTACGC
--AGTCACGC
 C G T A A G T C C G T A A C T G A C G T A G C T C G T A A G T C C T A G A G T C
A C G T A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:2
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--ACAGTTACGC
BRRCVGTTDN--
 A C G T A C G T C G T A A G T C C G T A A C T G A C G T A G C T C G T A A G T C C T A G A G T C
A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G A C G T A C G T

PB0159.1_Rfx4_2/Jaspar

Match Rank:3
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----ACAGTTACGC-
TACCCTAGTTACCGA
 A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C T G A C G T A G C T C G T A A G T C C T A G A G T C A C G T
G C A T G T C A A T G C A T G C G T A C C A G T T C G A A C T G C G A T A C G T C G T A A G T C T A G C T A C G G T C A

Myb/MA0100.2/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--ACAGTTACGC
TGGCAGTTGN--
 A C G T A C G T C G T A A G T C C G T A A C T G A C G T A G C T C G T A A G T C C T A G A G T C
C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G A C G T A C G T

HMBOX1/MA0895.1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-ACAGTTACGC
ACTAGTTAAC-
 A C G T C G T A A G T C C G T A A C T G A C G T A G C T C G T A A G T C C T A G A G T C
T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C A C G T

PB0046.1_Mybl1_1/Jaspar

Match Rank:6
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------ACAGTTACGC-
TTGAAAACCGTTAATTT
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C T G A C G T A G C T C G T A A G T C C T A G A G T C A C G T
G A C T C G A T C A T G C G T A G C T A C T G A C T G A G T A C A T G C A C T G A C G T G A C T C T G A G C T A G C A T G A C T C G A T

Atf1/MA0604.1/Jaspar

Match Rank:7
Score:0.56
Offset:3
Orientation:forward strand
Alignment:ACAGTTACGC-
---ATGACGTA
 C G T A A G T C C G T A A C T G A C G T A G C T C G T A A G T C C T A G A G T C A C G T
A C G T A C G T A C G T T C G A G C A T A C T G C G T A A G T C C T A G G A C T T C G A

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.56
Offset:3
Orientation:forward strand
Alignment:ACAGTTACGC-------
---GTCACGCTCNCTGA
 C G T A A G T C C G T A A C T G A C G T A G C T C G T A A G T C C T A G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C T G G A C T A G T C C T G A G A T C T C A G A T G C G A C T A G T C A T G C T A G C A G C T A T C G T G C A

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-ACAGTTACGC
CACAGN-----
 A C G T C G T A A G T C C G T A A C T G A C G T A G C T C G T A A G T C C T A G A G T C
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--ACAGTTACGC
TGGCAGTTGG--
 A C G T A C G T C G T A A G T C C G T A A C T G A C G T A G C T C G T A A G T C C T A G A G T C
G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G A C G T A C G T