Information for 2-CCTTTGCTGCCACCTA (Motif 2)

G A T C A T G C G A C T G A C T A C G T C A T G G T A C A C G T T C A G G A T C A G T C G C T A A G T C G A T C G A C T T C G A
Reverse Opposite:
A G C T C T G A C T A G T A C G C G A T C T A G C T A G A G T C G T C A A C T G G T A C T G C A C T G A C T G A T A C G C T A G
p-value:1e-32
log p-value:-7.586e+01
Information Content per bp:1.646
Number of Target Sequences with motif42.0
Percentage of Target Sequences with motif4.86%
Number of Background Sequences with motif164.1
Percentage of Background Sequences with motif0.34%
Average Position of motif in Targets52.8 +/- 15.0bp
Average Position of motif in Background50.9 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:1
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CCTTTGCTGCCACCTA
--CTGTCTGTCACCT-
 G A T C A T G C G A C T G A C T A C G T C A T G G T A C A C G T T C A G G A T C A G T C G C T A A G T C G A T C G A C T T C G A
A C G T A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.61
Offset:7
Orientation:reverse strand
Alignment:CCTTTGCTGCCACCTA
-------TGACACCT-
 G A T C A T G C G A C T G A C T A C G T C A T G G T A C A C G T T C A G G A T C A G T C G C T A A G T C G A T C G A C T T C G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:3
Score:0.61
Offset:6
Orientation:forward strand
Alignment:CCTTTGCTGCCACCTA
------ATGCCAACC-
 G A T C A T G C G A C T G A C T A C G T C A T G G T A C A C G T T C A G G A T C A G T C G C T A A G T C G A T C G A C T T C G A
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CCTTTGCTGCCACCTA
---TGTCTGDCACCT-
 G A T C A T G C G A C T G A C T A C G T C A T G G T A C A C G T T C A G G A T C A G T C G C T A A G T C G A T C G A C T T C G A
A C G T A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:5
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CCTTTGCTGCCACCTA---
---ACTATGCCAACCTACC
 G A T C A T G C G A C T G A C T A C G T C A T G G T A C A C G T T C A G G A T C A G T C G C T A A G T C G A T C G A C T T C G A A C G T A C G T A C G T
A C G T A C G T A C G T C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CCTTTGCTGCCACCTA
----TGCTGACTCA--
 G A T C A T G C G A C T G A C T A C G T C A T G G T A C A C G T T C A G G A T C A G T C G C T A A G T C G A T C G A C T T C G A
A C G T A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CCTTTGCTGCCACCTA-----
-CNNBRGCGCCCCCTGSTGGC
 G A T C A T G C G A C T G A C T A C G T C A T G G T A C A C G T T C A G G A T C A G T C G C T A A G T C G A T C G A C T T C G A A C G T A C G T A C G T A C G T A C G T
A C G T T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CCTTTGCTGCCACCTA-------
---ANAGTGCCACCTGGTGGCCA
 G A T C A T G C G A C T G A C T A C G T C A T G G T A C A C G T T C A G G A T C A G T C G C T A A G T C G A T C G A C T T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:9
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CCTTTGCTGCCACCTA
----VGCTGWCAVB--
 G A T C A T G C G A C T G A C T A C G T C A T G G T A C A C G T T C A G G A T C A G T C G C T A A G T C G A T C G A C T T C G A
A C G T A C G T A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:10
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CCTTTGCTGCCACCTA-------
----TAGCGCCCCCTGGTGGCCA
 G A T C A T G C G A C T G A C T A C G T C A T G G T A C A C G T T C A G G A T C A G T C G C T A A G T C G A T C G A C T T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A