Information for 8-AATTTTTAAA (Motif 14)

T G C A G C T A C A G T A C G T C A G T G A C T C A G T G C T A C G T A G C T A
Reverse Opposite:
C G A T G C A T C G A T G T C A C T G A G C T A T G C A G T C A C G A T A C G T
p-value:1e-6
log p-value:-1.478e+01
Information Content per bp:1.532
Number of Target Sequences with motif155.0
Percentage of Target Sequences with motif17.94%
Number of Background Sequences with motif5767.3
Percentage of Background Sequences with motif12.08%
Average Position of motif in Targets51.3 +/- 28.5bp
Average Position of motif in Background49.6 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.24
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:AATTTTTAAA
CGGTTTCAAA
 T G C A G C T A C A G T A C G T C A G T G A C T C A G T G C T A C G T A G C T A
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A

LIN54/MA0619.1/Jaspar

Match Rank:2
Score:0.70
Offset:3
Orientation:forward strand
Alignment:AATTTTTAAA--
---ATTTGAATT
 T G C A G C T A C A G T A C G T C A G T G A C T C A G T G C T A C G T A G C T A A C G T A C G T
A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:3
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--AATTTTTAAA-
TTAATGTTTAACC
 A C G T A C G T T G C A G C T A C A G T A C G T C A G T G A C T C A G T G C T A C G T A G C T A A C G T
A C G T G C A T C T G A G T C A G C A T T A C G C G A T C A G T G A C T G C T A C G T A G A T C G A T C

Arid5a/MA0602.1/Jaspar

Match Rank:4
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AATTTTTAAA--
CTAATATTGCTAAA
 A C G T A C G T T G C A G C T A C A G T A C G T C A G T G A C T C A G T G C T A C G T A G C T A A C G T A C G T
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AATTTTTAAA--
CTAATATTGCTAAA
 A C G T A C G T T G C A G C T A C A G T A C G T C A G T G A C T C A G T G C T A C G T A G C T A A C G T A C G T
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:6
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--AATTTTTAAA
TTAATNATTAAC
 A C G T A C G T T G C A G C T A C A G T A C G T C A G T G A C T C A G T G C T A C G T A G C T A
A C G T G A C T T C G A G T C A G C A T T A G C C G T A C A G T A G C T C G T A T G C A G A T C

PB0165.1_Sox11_2/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AATTTTTAAA--
AAAATTGTTATGAA
 A C G T A C G T T G C A G C T A C A G T A C G T C A G T G A C T C A G T G C T A C G T A G C T A A C G T A C G T
C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

PB0175.1_Sox4_2/Jaspar

Match Rank:8
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----AATTTTTAAA--
GGAAAAATTGTTAGGAA
 A C G T A C G T A C G T A C G T A C G T T G C A G C T A C A G T A C G T C A G T G A C T C A G T G C T A C G T A G C T A A C G T A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

MEF2C/MA0497.1/Jaspar

Match Rank:9
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---AATTTTTAAA--
TTCTATTTTTAGNNN
 A C G T A C G T A C G T T G C A G C T A C A G T A C G T C A G T G A C T C A G T G C T A C G T A G C T A A C G T A C G T
C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

MF0010.1_Homeobox_class/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AATTTTTAAA
AATTATT---
 T G C A G C T A C A G T A C G T C A G T G A C T C A G T G C T A C G T A G C T A
G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T A C G T A C G T