Information for 3-HTTGTGATTGGCTGGT (Motif 4)

G T A C A C G T A C G T A C T G C G A T C A T G C T G A C G A T A C G T A C T G C A T G A G T C C G A T A C T G C T A G A G C T
Reverse Opposite:
C T G A A G T C G T A C G C T A A C T G G A T C G T A C G T C A G C T A A G C T G T A C C G T A T G A C G T C A C G T A C A T G
p-value:1e-20
log p-value:-4.666e+01
Information Content per bp:1.702
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.38%
Number of Background Sequences with motif6.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.9 +/- 21.8bp
Average Position of motif in Background24.2 +/- 18.2bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:1
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:HTTGTGATTGGCTGGT
---BTGABTGACAGS-
 G T A C A C G T A C G T A C T G C G A T C A T G C T G A C G A T A C G T A C T G C A T G A G T C C G A T A C T G C T A G A G C T
A C G T A C G T A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:HTTGTGATTGGCTGGT
---NTGATTGACAGN-
 G T A C A C G T A C G T A C T G C G A T C A T G C T G A C G A T A C G T A C T G C A T G A G T C C G A T A C T G C T A G A G C T
A C G T A C G T A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:3
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:HTTGTGATTGGCTGGT
----TGAGTGACAGSC
 G T A C A C G T A C G T A C T G C G A T C A T G C T G A C G A T A C G T A C T G C A T G A G T C C G A T A C T G C T A G A G C T
A C G T A C G T A C G T A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

POL004.1_CCAAT-box/Jaspar

Match Rank:4
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:HTTGTGATTGGCTGGT
----TGATTGGCTANN
 G T A C A C G T A C G T A C T G C G A T C A T G C T G A C G A T A C G T A C T G C A T G A G T C C G A T A C T G C T A G A G C T
A C G T A C G T A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

NFYB/MA0502.1/Jaspar

Match Rank:5
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:HTTGTGATTGGCTGGT--
---CTGATTGGTCNATTT
 G T A C A C G T A C G T A C T G C G A T C A T G C T G A C G A T A C G T A C T G C A T G A G T C C G A T A C T G C T A G A G C T A C G T A C G T
A C G T A C G T A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

Dux/MA0611.1/Jaspar

Match Rank:6
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:HTTGTGATTGGCTGGT
---TTGATTGN-----
 G T A C A C G T A C G T A C T G C G A T C A T G C T G A C G A T A C G T A C T G C A T G A G T C C G A T A C T G C T A G A G C T
A C G T A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:7
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:HTTGTGATTGGCTGGT
---CCGATTGGCT---
 G T A C A C G T A C G T A C T G C G A T C A T G C T G A C G A T A C G T A C T G C A T G A G T C C G A T A C T G C T A G A G C T
A C G T A C G T A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T A C G T

NFYA/MA0060.2/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---HTTGTGATTGGCTGGT
AGAGTGCTGATTGGTCCA-
 A C G T A C G T A C G T G T A C A C G T A C G T A C T G C G A T C A T G C T G A C G A T A C G T A C T G C A T G A G T C C G A T A C T G C T A G A G C T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A A C G T

PH0026.1_Duxbl/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--HTTGTGATTGGCTGGT
NNNNGTTGATTGGGTCG-
 A C G T A C G T G T A C A C G T A C G T A C T G C G A T C A T G C T G A C G A T A C G T A C T G C A T G A G T C C G A T A C T G C T A G A G C T
A T G C C G T A A G T C A G T C T C A G G A C T C G A T C T A G C T G A A C G T A C G T C T A G T C A G T C A G G A C T G A T C T C A G A C G T

Hmx3/MA0898.1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-HTTGTGATTGGCTGGT
ATTNNTTAATTGCTTGT
 A C G T G T A C A C G T A C G T A C T G C G A T C A T G C T G A C G A T A C G T A C T G C A T G A G T C C G A T A C T G C T A G A G C T
G C T A G C A T A G C T A G T C C G A T G C A T G C A T C T G A C G T A C A G T G A C T C T A G G A T C A G C T A C G T T A C G A C G T