Information for 3-RVNCAGCTGNBBS (Motif 3)

T C A G T G A C T G A C A G T C C G T A A C T G A G T C A C G T A C T G C T A G A T C G A G T C A T C G
Reverse Opposite:
T A G C T C A G T A G C G A T C A G T C C G T A A C T G A G T C A C G T A C T G A C T G A C T G A G T C
p-value:1e-22
log p-value:-5.245e+01
Information Content per bp:1.654
Number of Target Sequences with motif149.0
Percentage of Target Sequences with motif17.17%
Number of Background Sequences with motif3348.0
Percentage of Background Sequences with motif7.06%
Average Position of motif in Targets50.4 +/- 22.5bp
Average Position of motif in Background50.4 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:1
Score:0.97
Offset:2
Orientation:reverse strand
Alignment:RVNCAGCTGNBBS
--HCAGCTGDTN-
 T C A G T G A C T G A C A G T C C G T A A C T G A G T C A C G T A C T G C T A G A T C G A G T C A T C G
A C G T A C G T G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.93
Offset:2
Orientation:forward strand
Alignment:RVNCAGCTGNBBS
--NCAGCTGCTG-
 T C A G T G A C T G A C A G T C C G T A A C T G A G T C A C G T A C T G C T A G A T C G A G T C A T C G
A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:3
Score:0.93
Offset:2
Orientation:reverse strand
Alignment:RVNCAGCTGNBBS
--GCAGCTGTNN-
 T C A G T G A C T G A C A G T C C G T A A C T G A G T C A C G T A C T G C T A G A T C G A G T C A T C G
A C G T A C G T T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T A C G T

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.93
Offset:2
Orientation:forward strand
Alignment:RVNCAGCTGNBBS
--ACAGCTGTTN-
 T C A G T G A C T G A C A G T C C G T A A C T G A G T C A C G T A C T G C T A G A T C G A G T C A T C G
A C G T A C G T T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A G T C A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:5
Score:0.93
Offset:3
Orientation:reverse strand
Alignment:RVNCAGCTGNBBS
---CAGCTGTT--
 T C A G T G A C T G A C A G T C C G T A A C T G A G T C A C G T A C T G C T A G A T C G A G T C A T C G
A C G T A C G T A C G T A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:6
Score:0.92
Offset:2
Orientation:reverse strand
Alignment:RVNCAGCTGNBBS
--CCAGCTGTTN-
 T C A G T G A C T G A C A G T C C G T A A C T G A G T C A C G T A C T G C T A G A T C G A G T C A T C G
A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A A C G T

Myog/MA0500.1/Jaspar

Match Rank:7
Score:0.92
Offset:0
Orientation:reverse strand
Alignment:RVNCAGCTGNBBS
NNGCAGCTGTC--
 T C A G T G A C T G A C A G T C C G T A A C T G A G T C A C G T A C T G C T A G A T C G A G T C A T C G
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:8
Score:0.91
Offset:1
Orientation:forward strand
Alignment:RVNCAGCTGNBBS
-AGCAGCTGCTNN
 T C A G T G A C T G A C A G T C C G T A A C T G A G T C A C G T A C T G C T A G A T C G A G T C A T C G
A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:9
Score:0.91
Offset:1
Orientation:reverse strand
Alignment:RVNCAGCTGNBBS
-NVCAGCTGBBNN
 T C A G T G A C T G A C A G T C C G T A A C T G A G T C A C G T A C T G C T A G A T C G A G T C A T C G
A C G T T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C

Tcf12/MA0521.1/Jaspar

Match Rank:10
Score:0.91
Offset:0
Orientation:reverse strand
Alignment:RVNCAGCTGNBBS
NNGCAGCTGTT--
 T C A G T G A C T G A C A G T C C G T A A C T G A G T C A C G T A C T G C T A G A T C G A G T C A T C G
A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T