Information for 16-TCCGACATGC (Motif 24)

C A G T T A G C T G A C T A C G C G T A A T G C C G T A A C G T T C A G T A G C
Reverse Opposite:
A T C G A G T C G T C A G C A T A T C G G C A T A T G C A C T G A T C G G T C A
p-value:1e-2
log p-value:-6.640e+00
Information Content per bp:1.731
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.27%
Number of Background Sequences with motif198.2
Percentage of Background Sequences with motif0.42%
Average Position of motif in Targets41.5 +/- 23.8bp
Average Position of motif in Background49.2 +/- 33.4bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY2/MA0748.1/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TCCGACATGC
GTCCGCCATTA
 A C G T C A G T T A G C T G A C T A C G C G T A A T G C C G T A A C G T T C A G T A G C
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A

PB0147.1_Max_2/Jaspar

Match Rank:2
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TCCGACATGC-----
-GTGCCACGCGACTG
 C A G T T A G C T G A C T A C G C G T A A T G C C G T A A C G T T C A G T A G C A C G T A C G T A C G T A C G T A C G T
A C G T A C T G A G C T A C T G G A T C A G T C C G T A A G T C T C A G G A T C A C T G T C G A T G A C C A G T C A T G

MEIS1/MA0498.2/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TCCGACATGC
-TTGACAG--
 C A G T T A G C T G A C T A C G C G T A A T G C C G T A A C G T T C A G T A G C
A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:4
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----TCCGACATGC--
CAAATCCAGACATCACA
 A C G T A C G T A C G T A C G T A C G T C A G T T A G C T G A C T A C G C G T A A T G C C G T A A C G T T C A G T A G C A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Atf1/MA0604.1/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TCCGACATGC
TACGTCAT--
 C A G T T A G C T G A C T A C G C G T A A T G C C G T A A C G T T C A G T A G C
A G C T C T G A A G T C A C T G A C G T T G A C C G T A A G C T A C G T A C G T

PB0108.1_Atf1_2/Jaspar

Match Rank:6
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TCCGACATGC
NTTATTCGTCATNC
 A C G T A C G T A C G T A C G T C A G T T A G C T G A C T A C G C G T A A T G C C G T A A C G T T C A G T A G C
C A T G G C A T G C A T T C G A G A C T C A G T A G T C T A C G G A C T G A T C T C G A A G C T G A C T A T G C

PH0086.1_Irx5/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TCCGACATGC-----
ANTNNTACATGTANNTN
 A C G T A C G T C A G T T A G C T G A C T A C G C G T A A T G C C G T A A C G T T C A G T A G C A C G T A C G T A C G T A C G T A C G T
G C T A G T C A G C A T G C A T C A G T C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A C G A T G C T A G C A T G C A T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:8
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:TCCGACATGC
---GTCATN-
 C A G T T A G C T G A C T A C G C G T A A T G C C G T A A C G T T C A G T A G C
A C G T A C G T A C G T T C A G A C G T G A T C C G T A A G C T A T C G A C G T

Pax2/MA0067.1/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:TCCGACATGC
--AGTCACGC
 C A G T T A G C T G A C T A C G C G T A A T G C C G T A A C G T T C A G T A G C
A C G T A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G

TEAD3/MA0808.1/Jaspar

Match Rank:10
Score:0.53
Offset:4
Orientation:forward strand
Alignment:TCCGACATGC--
----ACATTCCA
 C A G T T A G C T G A C T A C G C G T A A T G C C G T A A C G T T C A G T A G C A C G T A C G T
A C G T A C G T A C G T A C G T C T G A T G A C C G T A A C G T C G A T A G T C A G T C C G T A