Information for 11-GACAGTTGCTGGG (Motif 17)

A C T G C G T A A G T C C G T A C T A G A C G T A C G T A T C G G T A C A C G T A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C G T A C C G T A A C T G A T G C C G T A C G T A A G T C A C G T A C T G C G A T A G T C
p-value:1e-7
log p-value:-1.793e+01
Information Content per bp:1.929
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.4 +/- 30.3bp
Average Position of motif in Background34.0 +/- 4.3bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:GACAGTTGCTGGG-
--CTGTTGCTAGGS
 A C T G C G T A A G T C C G T A C T A G A C G T A C G T A T C G G T A C A C G T A C T G A C T G A C T G A C G T
A C G T A C G T A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

Myb/MA0100.2/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GACAGTTGCTGGG
TGGCAGTTGN----
 A C G T A C T G C G T A A G T C C G T A C T A G A C G T A C G T A T C G G T A C A C G T A C T G A C T G A C T G
C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G A C G T A C G T A C G T A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:3
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----GACAGTTGCTGGG
NNNTGGCAGTTGGTNN-
 A C G T A C G T A C G T A C G T A C T G C G T A A G T C C G T A C T A G A C G T A C G T A T C G G T A C A C G T A C T G A C T G A C T G
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G A C G T

PB0150.1_Mybl1_2/Jaspar

Match Rank:4
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GACAGTTGCTGGG
CACGGCAGTTGGTNN-
 A C G T A C G T A C G T A C T G C G T A A G T C C G T A C T A G A C G T A C G T A T C G G T A C A C G T A C T G A C T G A C T G
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:5
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GACAGTTGCTGGG
TGGCAGTTGG----
 A C G T A C T G C G T A A G T C C G T A C T A G A C G T A C G T A T C G G T A C A C G T A C T G A C T G A C T G
G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G A C G T A C G T A C G T A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GACAGTTGCTGGG---
-NCCGTTGCTANGNGN
 A C T G C G T A A G T C C G T A C T A G A C G T A C G T A T C G G T A C A C G T A C T G A C T G A C T G A C G T A C G T A C G T
A C G T G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:7
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GACAGTTGCTGGG-----
---KGTTGCTAGGMAACA
 A C T G C G T A A G T C C G T A C T A G A C G T A C G T A T C G G T A C A C G T A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A C T G A G C T C G A T C T A G A G T C A G C T C T G A C T A G A C T G T G C A C T G A T C G A A G T C G T C A

Myog/MA0500.1/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GACAGTTGCTGGG
GACAGCTGCAG--
 A C T G C G T A A G T C C G T A C T A G A C G T A C G T A T C G G T A C A C G T A C T G A C T G A C T G
T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GACAGTTGCTGGG
AACAGCTGCAG--
 A C T G C G T A A G T C C G T A C T A G A C G T A C G T A T C G G T A C A C G T A C T G A C T G A C T G
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G A C G T A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GACAGTTGCTGGG---
-NNCGTTGCTATGGNN
 A C T G C G T A A G T C C G T A C T A G A C G T A C G T A T C G G T A C A C G T A C T G A C T G A C T G A C G T A C G T A C G T
A C G T G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A