Information for 6-YTCASCMKGGCCMGCC (Motif 16)

A G T C A C G T A T G C T C G A T A C G A G T C G T A C A C T G A T C G A C T G A G T C A G T C T G A C A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C A C T G A C T G A C T G A G T C A T G C G T A C A C T G A C T G A T G C A C G T A T C G C G T A C T A G
p-value:1e-10
log p-value:-2.461e+01
Information Content per bp:1.840
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.4 +/- 29.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SP2/MA0516.1/Jaspar

Match Rank:1
Score:0.56
Offset:8
Orientation:forward strand
Alignment:YTCASCMKGGCCMGCC-------
--------GCCCCGCCCCCTCCC
 A G T C A C G T A T G C T C G A T A C G A G T C G T A C A C T G A T C G A C T G A G T C A G T C T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

Sp1(Zf)/Promoter/Homer

Match Rank:2
Score:0.56
Offset:7
Orientation:forward strand
Alignment:YTCASCMKGGCCMGCC---
-------GGCCCCGCCCCC
 A G T C A C G T A T G C T C G A T A C G A G T C G T A C A C T G A T C G A C T G A G T C A G T C T G A C A C T G A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:3
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-YTCASCMKGGCCMGCC
DCTCAGCAGG-------
 A C G T A G T C A C G T A T G C T C G A T A C G A G T C G T A C A C T G A T C G A C T G A G T C A G T C T G A C A C T G A G T C A G T C
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL011.1_XCPE1/Jaspar

Match Rank:4
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:YTCASCMKGGCCMGCC-
-------GGTCCCGCCC
 A G T C A C G T A T G C T C G A T A C G A G T C G T A C A C T G A T C G A C T G A G T C A G T C T G A C A C T G A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C

POL003.1_GC-box/Jaspar

Match Rank:5
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:YTCASCMKGGCCMGCC----
------NAGCCCCGCCCCCN
 A G T C A C G T A T G C T C G A T A C G A G T C G T A C A C T G A T C G A C T G A G T C A G T C T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

POL006.1_BREu/Jaspar

Match Rank:6
Score:0.52
Offset:8
Orientation:forward strand
Alignment:YTCASCMKGGCCMGCC
--------AGCGCGCC
 A G T C A C G T A T G C T C G A T A C G A G T C G T A C A C T G A T C G A C T G A G T C A G T C T G A C A C T G A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C

PB0164.1_Smad3_2/Jaspar

Match Rank:7
Score:0.52
Offset:5
Orientation:forward strand
Alignment:YTCASCMKGGCCMGCC------
-----TACGCCCCGCCACTCTG
 A G T C A C G T A T G C T C G A T A C G A G T C G T A C A C T G A T C G A C T G A G T C A G T C T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

PB0009.1_E2F3_1/Jaspar

Match Rank:8
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:YTCASCMKGGCCMGCC-----
------ANCGCGCGCCCTTNN
 A G T C A C G T A T G C T C G A T A C G A G T C G T A C A C T G A T C G A C T G A G T C A G T C T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

PB0180.1_Sp4_2/Jaspar

Match Rank:9
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:YTCASCMKGGCCMGCC----
-----NNGGCCACGCCTTTN
 A G T C A C G T A T G C T C G A T A C G A G T C G T A C A C T G A T C G A C T G A G T C A G T C T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

PB0008.1_E2F2_1/Jaspar

Match Rank:10
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:YTCASCMKGGCCMGCC-----
------NTCGCGCGCCTTNNN
 A G T C A C G T A T G C T C G A T A C G A G T C G T A C A C T G A T C G A C T G A G T C A G T C T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T