Information for 9-TTCCTYHTGACCT (Motif 9)

A C G T A C G T G T A C A G T C A G C T A G T C G T A C A C G T A C T G T C G A T A G C A T G C A C G T
Reverse Opposite:
C G T A A T C G A T C G A C G T G T A C C G T A C A G T T C A G C T G A A C T G C A T G C G T A C G T A
p-value:1e-9
log p-value:-2.265e+01
Information Content per bp:1.760
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.16%
Number of Background Sequences with motif26.7
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets45.3 +/- 29.2bp
Average Position of motif in Background39.8 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR2F1/MA0017.2/Jaspar

Match Rank:1
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:TTCCTYHTGACCT---
---CNNTTGACCTTTG
 A C G T A C G T G T A C A G T C A G C T A G T C G T A C A C G T A C T G T C G A T A G C A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:2
Score:0.69
Offset:7
Orientation:reverse strand
Alignment:TTCCTYHTGACCT--
-------TGACCTYA
 A C G T A C G T G T A C A G T C A G C T A G T C G T A C A C G T A C T G T C G A T A G C A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TTCCTYHTGACCT-
TGACCTTTGACCTC
 A C G T A C G T G T A C A G T C A G C T A G T C G T A C A C G T A C T G T C G A T A G C A T G C A C G T A C G T
G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C

NR4A2/MA0160.1/Jaspar

Match Rank:4
Score:0.66
Offset:6
Orientation:reverse strand
Alignment:TTCCTYHTGACCT-
------GTGACCTT
 A C G T A C G T G T A C A G T C A G C T A G T C G T A C A C G T A C T G T C G A T A G C A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:5
Score:0.66
Offset:7
Orientation:reverse strand
Alignment:TTCCTYHTGACCT
-------TGACCT
 A C G T A C G T G T A C A G T C A G C T A G T C G T A C A C G T A C T G T C G A T A G C A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

RORA/MA0071.1/Jaspar

Match Rank:6
Score:0.66
Offset:7
Orientation:reverse strand
Alignment:TTCCTYHTGACCT----
-------TGACCTTGAT
 A C G T A C G T G T A C A G T C A G C T A G T C G T A C A C G T A C T G T C G A T A G C A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:7
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:TTCCTYHTGACCT------
---NNNNTGACCTTTNNNN
 A C G T A C G T G T A C A G T C A G C T A G T C G T A C A C G T A C T G T C G A T A G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.64
Offset:6
Orientation:forward strand
Alignment:TTCCTYHTGACCT---
------NTGACCTTGA
 A C G T A C G T G T A C A G T C A G C T A G T C G T A C A C G T A C T G T C G A T A G C A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

NR2C2/MA0504.1/Jaspar

Match Rank:9
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TTCCTYHTGACCT--
TGACCTCTGACCCCN
 A C G T A C G T G T A C A G T C A G C T A G T C G T A C A C G T A C T G T C G A T A G C A T G C A C G T A C G T A C G T
G A C T T C A G T G C A G T A C A G T C A G C T A G T C G A C T T A C G G T C A G T A C T G A C A G T C A G T C A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.64
Offset:6
Orientation:reverse strand
Alignment:TTCCTYHTGACCT---
------CTGACCTTTG
 A C G T A C G T G T A C A G T C A G C T A G T C G T A C A C G T A C T G T C G A T A G C A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G