Information for 10-GAAGAAGAGA (Motif 12)

C A T G C G T A T G C A T A C G C G T A T C G A C T A G T C G A T C A G C G T A
Reverse Opposite:
A C G T A G T C A G C T A G T C A G C T G C A T A T G C A C G T G C A T G A T C
p-value:1e-7
log p-value:-1.754e+01
Information Content per bp:1.738
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif3.02%
Number of Background Sequences with motif369.9
Percentage of Background Sequences with motif0.82%
Average Position of motif in Targets55.6 +/- 25.8bp
Average Position of motif in Background50.9 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GAAGAAGAGA
NGAAGC-----
 A C G T C A T G C G T A T G C A T A C G C G T A T C G A C T A G T C G A T C A G C G T A
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GAAGAAGAGA---
ATAAGAACAAAGGACTA
 A C G T A C G T A C G T A C G T C A T G C G T A T G C A T A C G C G T A T C G A C T A G T C G A T C A G C G T A A C G T A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0071.1_Sox4_1/Jaspar

Match Rank:3
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GAAGAAGAGA---
AGAAGAACAAAGGACTA
 A C G T A C G T A C G T A C G T C A T G C G T A T G C A T A C G C G T A T C G A C T A G T C G A T C A G C G T A A C G T A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GAAGAAGAGA---
-CGGAAGTGAAAC
 C A T G C G T A T G C A T A C G C G T A T C G A C T A G T C G A T C A G C G T A A C G T A C G T A C G T
A C G T T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C

PB0137.1_Irf3_2/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GAAGAAGAGA----
GGAGAAAGGTGCGA
 C A T G C G T A T G C A T A C G C G T A T C G A C T A G T C G A T C A G C G T A A C G T A C G T A C G T A C G T
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GAAGAAGAGA
GAACAATGGN
 C A T G C G T A T G C A T A C G C G T A T C G A C T A G T C G A T C A G C G T A
C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G

Mecom/MA0029.1/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GAAGAAGAGA-----
-AAGATAAGATAACA
 C A T G C G T A T G C A T A C G C G T A T C G A C T A G T C G A T C A G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GAAGAAGAGA
AGAGGAAGTG-
 A C G T C A T G C G T A T G C A T A C G C G T A T C G A C T A G T C G A T C A G C G T A
C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G A C G T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:9
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----GAAGAAGAGA
TACTGGAAAAAAAA-
 A C G T A C G T A C G T A C G T A C G T C A T G C G T A T G C A T A C G C G T A T C G A C T A G T C G A T C A G C G T A
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GAAGAAGAGA
GGAACAAAGR-
 A C G T C A T G C G T A T G C A T A C G C G T A T C G A C T A G T C G A T C A G C G T A
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T