Information for 17-GTCAAGGGCC (Motif 27)

A C T G A C G T A G T C C G T A C G T A A C T G A C T G A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G G T A C A G T C A G T C A C G T A C G T T C A G C G T A A G T C
p-value:1e-6
log p-value:-1.549e+01
Information Content per bp:1.926
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif22.3
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets72.7 +/- 9.9bp
Average Position of motif in Background44.1 +/- 23.8bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:1
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--GTCAAGGGCC
AGGTCAAGGTCA
 A C G T A C G T A C T G A C G T A G T C C G T A C G T A A C T G A C T G A C T G A G T C A G T C
C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:2
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GTCAAGGGCC
NTCAAGGTCA
 A C T G A C G T A G T C C G T A C G T A A C T G A C T G A C T G A G T C A G T C
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:3
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GTCAAGGGCC
AGGTCAAGGTCA
 A C G T A C G T A C T G A C G T A G T C C G T A C G T A A C T G A C T G A C T G A G T C A G T C
T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:4
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GTCAAGGGCC
BTCAAGGTCA
 A C T G A C G T A G T C C G T A C G T A A C T G A C T G A C T G A G T C A G T C
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A

Nr5a2/MA0505.1/Jaspar

Match Rank:5
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GTCAAGGGCC--
AAGTTCAAGGTCAGC
 A C G T A C G T A C G T A C T G A C G T A G T C C G T A C G T A A C T G A C T G A C T G A G T C A G T C A C G T A C G T
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

ESRRB/MA0141.3/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GTCAAGGGCC--
-TCAAGGTCATA
 A C T G A C G T A G T C C G T A C G T A A C T G A C T G A C T G A G T C A G T C A C G T A C G T
A C G T G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A

Esrrg/MA0643.1/Jaspar

Match Rank:7
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GTCAAGGGCC-
-TCAAGGTCAT
 A C T G A C G T A G T C C G T A C G T A A C T G A C T G A C T G A G T C A G T C A C G T
A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:8
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GTCAAGGGCC--
--CAAGGHCANV
 A C T G A C G T A G T C C G T A C G T A A C T G A C T G A C T G A G T C A G T C A C G T A C G T
A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

Hnf4a/MA0114.3/Jaspar

Match Rank:9
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GTCAAGGGCC---
GGGGTCAAAGTCCAAT
 A C G T A C G T A C G T A C T G A C G T A G T C C G T A C G T A A C T G A C T G A C T G A G T C A G T C A C G T A C G T A C G T
T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T

Esrra/MA0592.2/Jaspar

Match Rank:10
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GTCAAGGGCC-
TTCAAGGTCAT
 A C T G A C G T A G T C C G T A C G T A A C T G A C T G A C T G A G T C A G T C A C G T
A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T