Information for 8-GCCCTCTAGCCAA (Motif 8)

A C T G A G T C G A T C G A T C G A C T A T G C G A C T C T G A A T C G T A G C G T A C G T C A T G C A
Reverse Opposite:
A C G T A C G T A C T G A C T G T A G C G A C T C T G A A T C G C T G A C T A G C T A G T C A G T G A C
p-value:1e-9
log p-value:-2.152e+01
Information Content per bp:1.541
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.6 +/- 24.8bp
Average Position of motif in Background56.4 +/- 17.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GCCCTCTAGCCAA
TGCCCTGAGGGCA-
 A C G T A C T G A G T C G A T C G A T C G A C T A T G C G A C T C T G A A T C G T A G C G T A C G T C A T G C A
G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A A C G T

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GCCCTCTAGCCAA
TGCCCTGAGGGCA-
 A C G T A C T G A G T C G A T C G A T C G A C T A T G C G A C T C T G A A T C G T A G C G T A C G T C A T G C A
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GCCCTCTAGCCAA
TGCCCNNAGGGCA-
 A C G T A C T G A G T C G A T C G A T C G A C T A T G C G A C T C T G A A T C G T A G C G T A C G T C A T G C A
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:4
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GCCCTCTAGCCAA
-SCCTSAGGSCAW
 A C T G A G T C G A T C G A T C G A C T A T G C G A C T C T G A A T C G T A G C G T A C G T C A T G C A
A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GCCCTCTAGCCAA
-GCCTCAGGGCAT
 A C T G A G T C G A T C G A T C G A C T A T G C G A C T C T G A A T C G T A G C G T A C G T C A T G C A
A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCCCTCTAGCCAA-
TGACCTTTGCCCTAN
 A C G T A C T G A G T C G A T C G A T C G A C T A T G C G A C T C T G A A T C G T A G C G T A C G T C A T G C A A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

NFIC/MA0161.1/Jaspar

Match Rank:7
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:GCCCTCTAGCCAA
-------TGCCAA
 A C T G A G T C G A T C G A T C G A C T A T G C G A C T C T G A A T C G T A G C G T A C G T C A T G C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.60
Offset:5
Orientation:forward strand
Alignment:GCCCTCTAGCCAA-
-----CGTGCCAAG
 A C T G A G T C G A T C G A T C G A C T A T G C G A C T C T G A A T C G T A G C G T A C G T C A T G C A A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCCCTCTAGCCAA
TGACCTTTGCCCCA
 A C G T A C T G A G T C G A T C G A T C G A C T A T G C G A C T C T G A A T C G T A G C G T A C G T C A T G C A
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCCCTCTAGCCAA
TGACCTTTGCCCTA
 A C G T A C T G A G T C G A T C G A T C G A C T A T G C G A C T C T G A A T C G T A G C G T A C G T C A T G C A
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A