Information for 9-GARAARGTCMCTS (Motif 9)

A C T G C G T A T C A G G T C A C G T A C T G A A C T G A C G T A G T C G T A C A G T C A C G T A T C G
Reverse Opposite:
A T G C C G T A A C T G A C T G A C T G C G T A A G T C A G C T A C G T A C G T A G T C A C G T A G T C
p-value:1e-9
log p-value:-2.140e+01
Information Content per bp:1.875
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif5.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.7 +/- 17.0bp
Average Position of motif in Background57.3 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GARAARGTCMCTS
ANGNAAAGGTCA---
 A C G T A C G T A C T G C G T A T C A G G T C A C G T A C T G A A C T G A C G T A G T C G T A C A G T C A C G T A T C G
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:2
Score:0.65
Offset:3
Orientation:forward strand
Alignment:GARAARGTCMCTS
---AAGGTCAC--
 A C T G C G T A T C A G G T C A C G T A C T G A A C T G A C G T A G T C G T A C A G T C A C G T A T C G
A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GARAARGTCMCTS-
TCTCAAAGGTCACCTG
 A C G T A C G T A C T G C G T A T C A G G T C A C G T A C T G A A C T G A C G T A G T C G T A C A G T C A C G T A T C G A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

PB0049.1_Nr2f2_1/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GARAARGTCMCTS-
TCTCAAAGGTCACGAG
 A C G T A C G T A C T G C G T A T C A G G T C A C G T A C T G A A C T G A C G T A G T C G T A C A G T C A C G T A T C G A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GARAARGTCMCTS
-TCAAGGTCAN--
 A C T G C G T A T C A G G T C A C G T A C T G A A C T G A C G T A G T C G T A C A G T C A C G T A T C G
A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GARAARGTCMCTS
GAAAGTGAAAGT-----
 A C G T A C G T A C G T A C G T A C T G C G T A T C A G G T C A C G T A C T G A A C T G A C G T A G T C G T A C A G T C A C G T A T C G
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T A C G T A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GARAARGTCMCTS
-TCAAGGTCAT--
 A C T G C G T A T C A G G T C A C G T A C T G A A C T G A C G T A G T C G T A C A G T C A C G T A T C G
A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:8
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GARAARGTCMCTS
--AAAAGTCAA--
 A C T G C G T A T C A G G T C A C G T A C T G A A C T G A C G T A G T C G T A C A G T C A C G T A T C G
A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GARAARGTCMCTS--
TATTCAAGGTCATGCGA
 A C G T A C G T A C T G C G T A T C A G G T C A C G T A C T G A A C T G A C G T A G T C G T A C A G T C A C G T A T C G A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

PB0200.1_Zfp187_2/Jaspar

Match Rank:10
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----GARAARGTCMCTS
NNAGGGACAAGGGCNC--
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A T C A G G T C A C G T A C T G A A C T G A C G T A G T C G T A C A G T C A C G T A T C G
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C A C G T A C G T