Information for 3-GGAAACTGCAGGC (Motif 4)

A C T G A C T G C G T A C T G A G T C A A G T C A C G T C T A G G T A C C G T A A C T G C T A G A G T C
Reverse Opposite:
A C T G A G T C A G T C A C G T A C T G A G T C C G T A A C T G A C G T A G C T C G A T A G T C A G T C
p-value:1e-13
log p-value:-3.206e+01
Information Content per bp:1.881
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets33.3 +/- 22.7bp
Average Position of motif in Background37.3 +/- 3.4bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GGAAACTGCAGGC
AGAGRRACAGCWGAC
 A C G T A C G T A C T G A C T G C G T A C T G A G T C A A G T C A C G T C T A G G T A C C G T A A C T G C T A G A G T C
T C G A C T A G C G T A C T A G C T G A T C A G C G T A A G T C C G T A T C A G T G A C G C A T A C T G C G T A A G T C

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GGAAACTGCAGGC
AGGAAACAGCTG--
 A C G T A C T G A C T G C G T A C T G A G T C A A G T C A C G T C T A G G T A C C G T A A C T G C T A G A G T C
T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G A C G T A C G T

LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GGAAACTGCAGGC--
GGGTTACTANAGGTCA
 A C G T A C T G A C T G C G T A C T G A G T C A A G T C A C G T C T A G G T A C C G T A A C T G C T A G A G T C A C G T A C G T
C T A G C A T G C A T G A G C T G A C T C G T A G A T C A G C T G T C A A T G C T C G A C T A G C A T G A C G T A G T C C T G A

GFY(?)/Promoter/Homer

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGAAACTGCAGGC
GGGAATTGTAGT-
 A C T G A C T G C G T A C T G A G T C A A G T C A C G T C T A G G T A C C G T A A C T G C T A G A G T C
C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:5
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GGAAACTGCAGGC
NNTGGAAANN------
 A C G T A C G T A C G T A C T G A C T G C G T A C T G A G T C A A G T C A C G T C T A G G T A C C G T A A C T G C T A G A G T C
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GGAAACTGCAGGC
AATGGAAAAT------
 A C G T A C G T A C G T A C T G A C T G C G T A C T G A G T C A A G T C A C G T C T A G G T A C C G T A A C T G C T A G A G T C
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GGAAACTGCAGGC
-NAAACCACAG--
 A C T G A C T G C G T A C T G A G T C A A G T C A C G T C T A G G T A C C G T A A C T G C T A G A G T C
A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T

Nr1h3::Rxra/MA0494.1/Jaspar

Match Rank:8
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GGAAACTGCAGGC--
NNGAGGTTACTNNAGGTCA
 A C G T A C G T A C G T A C G T A C T G A C T G C G T A C T G A G T C A A G T C A C G T C T A G G T A C C G T A A C T G C T A G A G T C A C G T A C G T
T G A C G T C A T C A G T C G A C A T G C A T G A G C T G A C T G C T A G A T C G A C T G A C T A G C T T C G A C T A G C A T G C A G T A G T C T C G A

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GGAAACTGCAGGC
-GWAAYHTGAKMC
 A C T G A C T G C G T A C T G A G T C A A G T C A C G T C T A G G T A C C G T A A C T G C T A G A G T C
A C G T C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:10
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GGAAACTGCAGGC
AATGGAAAAT------
 A C G T A C G T A C G T A C T G A C T G C G T A C T G A G T C A A G T C A C G T C T A G G T A C C G T A A C T G C T A G A G T C
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T A C G T A C G T A C G T A C G T