Information for 8-CACAATYACAGGR (Motif 11)

A G T C C G T A A T G C G T C A C T G A A C G T A G C T C T G A G T A C C G T A T C A G A C T G C T A G
Reverse Opposite:
A G T C A G T C A G T C A C G T A C T G G A C T C T G A C G T A G A C T A C G T A T C G A C G T A C T G
p-value:1e-9
log p-value:-2.262e+01
Information Content per bp:1.831
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.3 +/- 18.4bp
Average Position of motif in Background45.1 +/- 19.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0172.1_Sox1_2/Jaspar

Match Rank:1
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----CACAATYACAGGR
NNNTAACAATTATAN--
 A C G T A C G T A C G T A C G T A G T C C G T A A T G C G T C A C T G A A C G T A G C T C T G A G T A C C G T A T C A G A C T G C T A G
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CACAATYACAGGR
GACAATGNN----
 A G T C C G T A A T G C G T C A C T G A A C G T A G C T C T G A G T A C C G T A T C A G A C T G C T A G
T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T A C G T A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:3
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CACAATYACAGGR
CTCACACAATGGCGC--
 A C G T A C G T A C G T A C G T A G T C C G T A A T G C G T C A C T G A A C G T A G C T C T G A G T A C C G T A T C A G A C T G C T A G
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C A C G T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:4
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------CACAATYACAGGR
TCACGGAACAATAGGTG--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T G C G T C A C T G A A C G T A G C T C T G A G T A C C G T A T C A G A C T G C T A G
G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G A C G T A C G T

SOX4/MA0867.1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CACAATYACAGGR--
GAACAATTGCAGTGTT
 A C G T A G T C C G T A A T G C G T C A C T G A A C G T A G C T C T G A G T A C C G T A T C A G A C T G C T A G A C G T A C G T
C T A G C G T A C T G A A G T C C T G A C T G A A C G T A C G T C A T G A G T C C T G A A C T G A C G T C T A G A G C T C G A T

PB0165.1_Sox11_2/Jaspar

Match Rank:6
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----CACAATYACAGGR
NNCNNAACAATTNT----
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T G C G T C A C T G A A C G T A G C T C T G A G T A C C G T A T C A G A C T G C T A G
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T A C G T A C G T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CACAATYACAGGR
-CAAATCACTG--
 A G T C C G T A A T G C G T C A C T G A A C G T A G C T C T G A G T A C C G T A T C A G A C T G C T A G
A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T A C G T

Sox11/MA0869.1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CACAATYACAGGR--
AACAATTTCAGTGTT
 A G T C C G T A A T G C G T C A C T G A A C G T A G C T C T G A G T A C C G T A T C A G A C T G C T A G A C G T A C G T
C G T A C G T A A G T C C G T A C G T A A C G T A G C T C A G T A G T C C G T A A C T G A C G T A C T G A C G T A G C T

Dlx3/MA0880.1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CACAATYACAGGR
-CCAATTAC----
 A G T C C G T A A T G C G T C A C T G A A C G T A G C T C T G A G T A C C G T A T C A G A C T G C T A G
A C G T T A G C G A T C G T C A G T C A G C A T A G C T G C T A G T A C A C G T A C G T A C G T A C G T

Dlx4/MA0881.1/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CACAATYACAGGR
-CCAATTAC----
 A G T C C G T A A T G C G T C A C T G A A C G T A G C T C T G A G T A C C G T A T C A G A C T G C T A G
A C G T T A G C G A T C G T C A G T C A G C A T A G C T G C T A G T A C A C G T A C G T A C G T A C G T