Information for 6-RACMWWTATTTGC (Motif 6)

C T A G C G T A A G T C G T C A C G T A C G A T A C G T C G T A A G C T A C G T A C G T A T C G A G T C
Reverse Opposite:
A C T G A T G C C G T A C G T A C T G A A C G T C G T A C G T A C G A T A C G T A C T G A C G T A G T C
p-value:1e-16
log p-value:-3.713e+01
Information Content per bp:1.875
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.1 +/- 26.6bp
Average Position of motif in Background37.4 +/- 21.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hmx1/MA0896.1/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:RACMWWTATTTGC----
ANNCATTAATTGCTNGN
 C T A G C G T A A G T C G T C A C G T A C G A T A C G T C G T A A G C T A C G T A C G T A T C G A G T C A C G T A C G T A C G T A C G T
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:RACMWWTATTTGC----
ANNCATTAATTGCTNGN
 C T A G C G T A A G T C G T C A C G T A C G A T A C G T C G T A A G C T A C G T A C G T A T C G A G T C A C G T A C G T A C G T A C G T
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:3
Score:0.64
Offset:6
Orientation:forward strand
Alignment:RACMWWTATTTGC---
------TRTTTACTTW
 C T A G C G T A A G T C G T C A C G T A C G A T A C G T C G T A A G C T A C G T A C G T A T C G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A

POU2F2/MA0507.1/Jaspar

Match Rank:4
Score:0.63
Offset:4
Orientation:forward strand
Alignment:RACMWWTATTTGC----
----TTCATTTGCATAT
 C T A G C G T A A G T C G T C A C G T A C G A T A C G T C G T A A G C T A C G T A C G T A T C G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.62
Offset:7
Orientation:reverse strand
Alignment:RACMWWTATTTGC----
-------ATTTGCATAT
 C T A G C G T A A G T C G T C A C G T A C G A T A C G T C G T A A G C T A C G T A C G T A T C G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.61
Offset:7
Orientation:forward strand
Alignment:RACMWWTATTTGC----
-------ATTTGCATAA
 C T A G C G T A A G T C G T C A C G T A C G A T A C G T C G T A A G C T A C G T A C G T A T C G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A

PH0063.1_Hoxb8/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:RACMWWTATTTGC----
-TTTATTAATTGCNNGN
 C T A G C G T A A G T C G T C A C G T A C G A T A C G T C G T A A G C T A C G T A C G T A T C G A G T C A C G T A C G T A C G T A C G T
A C G T G C A T G A C T A C G T C T G A C G A T G C A T C G T A C G T A A C G T C A G T C T A G G A T C G T A C T C A G A T C G C G A T

Hmx3/MA0898.1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:RACMWWTATTTGC----
ATTNNTTAATTGCTTGT
 C T A G C G T A A G T C G T C A C G T A C G A T A C G T C G T A A G C T A C G T A C G T A T C G A G T C A C G T A C G T A C G T A C G T
G C T A G C A T A G C T A G T C C G A T G C A T G C A T C T G A C G T A C A G T G A C T C T A G G A T C A G C T A C G T T A C G A C G T

PH0043.1_Hmx3/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:RACMWWTATTTGC----
ATTNNTTAATTGCTTGT
 C T A G C G T A A G T C G T C A C G T A C G A T A C G T C G T A A G C T A C G T A C G T A T C G A G T C A C G T A C G T A C G T A C G T
G C T A G C A T A G C T A G T C C G A T G C A T G C A T C T G A C G T A C A G T G A C T C T A G G A T C A G C T A C G T T A C G A C G T

FOXC1/MA0032.2/Jaspar

Match Rank:10
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:RACMWWTATTTGC---
-----ATATTTACATA
 C T A G C G T A A G T C G T C A C G T A C G A T A C G T C G T A A G C T A C G T A C G T A T C G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G A C T T C G A G A C T C A G T C A G T C G T A A G T C G C T A G A C T C G T A