Information for 13-GCCCCTTGCCCAG (Motif 25)

A C T G A G T C G T A C A G T C A T G C A C G T A C G T A C T G A T G C G T A C A G T C C G T A C T A G
Reverse Opposite:
A G T C A C G T A C T G A C T G A T C G A G T C C G T A C G T A A T C G A C T G A C T G A C T G A G T C
p-value:1e-5
log p-value:-1.370e+01
Information Content per bp:1.929
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.3 +/- 19.2bp
Average Position of motif in Background45.9 +/- 18.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.69
Offset:6
Orientation:reverse strand
Alignment:GCCCCTTGCCCAG---
------TGCCCAGNHW
 A C T G A G T C G T A C A G T C A T G C A C G T A C G T A C T G A T G C G T A C A G T C C G T A C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GCCCCTTGCCCAG
TGACCTTTGCCCTA
 A C G T A C T G A G T C G T A C A G T C A T G C A C G T A C G T A C T G A T G C G T A C A G T C C G T A C T A G
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GCCCCTTGCCCAG
-CCCCTCCCCCAC
 A C T G A G T C G T A C A G T C A T G C A C G T A C G T A C T G A T G C G T A C A G T C C G T A C T A G
A C G T T A G C G T A C A G T C G T A C C G A T A G T C A G T C A G T C A G T C A G T C C G T A G A T C

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCCCCTTGCCCAG-
TGACCTTTGCCCTAN
 A C G T A C T G A G T C G T A C A G T C A T G C A C G T A C G T A C T G A T G C G T A C A G T C C G T A C T A G A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GCCCCTTGCCCAG
KGCCCTTCCCCA-
 A C T G A G T C G T A C A G T C A T G C A C G T A C G T A C T G A T G C G T A C A G T C C G T A C T A G
C A G T C A T G G A T C G A T C G A T C G A C T A G C T T G A C G A T C G A T C G A T C C T G A A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCCCCTTGCCCAG
TGACCTTTGCCCCA
 A C G T A C T G A G T C G T A C A G T C A T G C A C G T A C G T A C T G A T G C G T A C A G T C C G T A C T A G
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A

REST/MA0138.2/Jaspar

Match Rank:7
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GCCCCTTGCCCAG----
TTCAGCACCATGGACAGCGCC
 A C G T A C G T A C G T A C G T A C T G A G T C G T A C A G T C A T G C A C G T A C G T A C T G A T G C G T A C A G T C C G T A C T A G A C G T A C G T A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

HIC2/MA0738.1/Jaspar

Match Rank:8
Score:0.57
Offset:5
Orientation:forward strand
Alignment:GCCCCTTGCCCAG-
-----ATGCCCACC
 A C T G A G T C G T A C A G T C A T G C A C G T A C G T A C T G A T G C G T A C A G T C C G T A C T A G A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GCCCCTTGCCCAG----
TCAGCACCATGGACAGCTCC
 A C G T A C G T A C G T A C T G A G T C G T A C A G T C A T G C A C G T A C G T A C T G A T G C G T A C A G T C C G T A C T A G A C G T A C G T A C G T A C G T
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

PB0200.1_Zfp187_2/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GCCCCTTGCCCAG--
GAGCCCTTGTCCCTAA
 A C G T A C T G A G T C G T A C A G T C A T G C A C G T A C G T A C T G A T G C G T A C A G T C C G T A C T A G A C G T A C G T
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G