Information for 9-GGCAACCGTA (Motif 13)

C T A G C A T G T G A C G T C A C G T A T A G C G T A C T A C G G C A T G C T A
Reverse Opposite:
C G A T C G T A A T G C C A T G A T C G G C A T C A G T A C T G G T A C G A T C
p-value:1e-10
log p-value:-2.486e+01
Information Content per bp:1.660
Number of Target Sequences with motif51.0
Percentage of Target Sequences with motif5.92%
Number of Background Sequences with motif938.1
Percentage of Background Sequences with motif1.99%
Average Position of motif in Targets51.3 +/- 27.2bp
Average Position of motif in Background50.3 +/- 30.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0051.1_Osr2_1/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---GGCAACCGTA---
CNNNGCTACTGTANNN
 A C G T A C G T A C G T C T A G C A T G T G A C G T C A C G T A T A G C G T A C T A C G G C A T G C T A A C G T A C G T A C G T
G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T

PB0045.1_Myb_1/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GGCAACCGTA-----
ATGGAAACCGTTATTTT
 A C G T A C G T C T A G C A T G T G A C G T C A C G T A T A G C G T A C T A C G G C A T G C T A A C G T A C G T A C G T A C G T A C G T
G C T A C G A T C A T G C A T G G T C A C T G A C T G A G T A C A T G C A C T G A C G T G A C T C T G A G C A T G C A T G A C T C G A T

PB0050.1_Osr1_1/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GGCAACCGTA---
TNNTGCTACTGTNNNN
 A C G T A C G T A C G T C T A G C A T G T G A C G T C A C G T A T A G C G T A C T A C G G C A T G C T A A C G T A C G T A C G T
G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T

PB0046.1_Mybl1_1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GGCAACCGTA-----
TTGAAAACCGTTAATTT
 A C G T A C G T C T A G C A T G T G A C G T C A C G T A T A G C G T A C T A C G G C A T G C T A A C G T A C G T A C G T A C G T A C G T
G A C T C G A T C A T G C G T A G C T A C T G A C T G A G T A C A T G C A C T G A C G T G A C T C T G A G C T A G C A T G A C T C G A T

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:5
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GGCAACCGTA-
---AACCGANA
 C T A G C A T G T G A C G T C A C G T A T A G C G T A C T A C G G C A T G C T A A C G T
A C G T A C G T A C G T C G T A C G T A T A G C A G T C C T A G G C T A G T A C G C T A

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GGCAACCGTA
SCCTAGCAACAG--
 A C G T A C G T A C G T A C G T C T A G C A T G T G A C G T C A C G T A T A G C G T A C T A C G G C A T G C T A
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T A C G T

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GGCAACCGTA-
-NHAACBGYYV
 C T A G C A T G T G A C G T C A C G T A T A G C G T A C T A C G G C A T G C T A A C G T
A C G T A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A

PB0055.1_Rfx4_1/Jaspar

Match Rank:8
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------GGCAACCGTA
TACCATAGCAACGGT-
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G C A T G T G A C G T C A C G T A T A G C G T A C T A C G G C A T G C T A
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T A C G T

Rfx1/MA0509.1/Jaspar

Match Rank:9
Score:0.59
Offset:-8
Orientation:forward strand
Alignment:--------GGCAACCGTA
GTTGCCATGGCAAC----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C A T G T G A C G T C A C G T A T A G C G T A C T A C G G C A T G C T A
C T A G A C G T G A C T A C T G A G T C A G T C G C T A G C A T C T A G C T A G G T A C C T G A C T G A A G T C A C G T A C G T A C G T A C G T

RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer

Match Rank:10
Score:0.59
Offset:-8
Orientation:reverse strand
Alignment:--------GGCAACCGTA
GTTGCCATGGCAACCG--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C A T G T G A C G T C A C G T A T A G C G T A C T A C G G C A T G C T A
C T A G A G C T G A C T C T A G A G T C A G T C G T C A C G A T T C A G T C A G G A T C C T G A T C G A G A T C T A G C T C A G A C G T A C G T