p-value: | 1e-11 |
log p-value: | -2.760e+01 |
Information Content per bp: | 1.758 |
Number of Target Sequences with motif | 9.0 |
Percentage of Target Sequences with motif | 1.00% |
Number of Background Sequences with motif | 10.0 |
Percentage of Background Sequences with motif | 0.02% |
Average Position of motif in Targets | 53.3 +/- 24.4bp |
Average Position of motif in Background | 39.6 +/- 18.4bp |
Strand Bias (log2 ratio + to - strand density) | -0.3 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
Match Rank: | 1 |
Score: | 0.59 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CGCAGAGCAGAAGGAR --CACAGCAGGGGG-- |
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PB0205.1_Zic1_2/Jaspar
Match Rank: | 2 |
Score: | 0.57 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CGCAGAGCAGAAGGAR- --CCACACAGCAGGAGA |
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PB0206.1_Zic2_2/Jaspar
Match Rank: | 3 |
Score: | 0.56 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CGCAGAGCAGAAGGAR- --CCACACAGCAGGAGA |
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Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer
Match Rank: | 4 |
Score: | 0.55 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CGCAGAGCAGAAGGAR -DCHCAGCAGGRGGCC |
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SPI1/MA0080.4/Jaspar
Match Rank: | 5 |
Score: | 0.55 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CGCAGAGCAGAAGGAR -AAAAAGCGGAAGTA- |
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ZIC1/MA0696.1/Jaspar
Match Rank: | 6 |
Score: | 0.55 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CGCAGAGCAGAAGGAR --CACAGCGGGGGGTC |
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ZIC3/MA0697.1/Jaspar
Match Rank: | 7 |
Score: | 0.54 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CGCAGAGCAGAAGGAR -NCGCAGCGGGGGGTC |
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PB0207.1_Zic3_2/Jaspar
Match Rank: | 8 |
Score: | 0.53 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CGCAGAGCAGAAGGAR- --GAGCACAGCAGGACA |
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POL008.1_DCE_S_I/Jaspar
Match Rank: | 9 |
Score: | 0.53 |
Offset: | 8 |
Orientation: | reverse strand |
Alignment: | CGCAGAGCAGAAGGAR --------NGAAGC-- |
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TFAP2B(var.2)/MA0812.1/Jaspar
Match Rank: | 10 |
Score: | 0.53 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | CGCAGAGCAGAAGGAR -----AGCCTCAGGCA |
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