Information for 3-CACGTGMNSC (Motif 4)

T G A C T C G A G A T C C T A G A C G T A C T G G T A C A T C G T A C G T A G C
Reverse Opposite:
A T C G A T G C T A G C C A T G T G A C T G C A G A T C C T A G A G C T A C T G
p-value:1e-26
log p-value:-6.179e+01
Information Content per bp:1.533
Number of Target Sequences with motif108.0
Percentage of Target Sequences with motif12.00%
Number of Background Sequences with motif1615.6
Percentage of Background Sequences with motif3.55%
Average Position of motif in Targets53.5 +/- 22.2bp
Average Position of motif in Background50.3 +/- 35.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.91
Offset:-1
Orientation:forward strand
Alignment:-CACGTGMNSC
KCACGTGMCN-
 A C G T T G A C T C G A G A T C C T A G A C G T A C T G G T A C A T C G T A C G T A G C
C A T G G T A C C G T A A G T C C T A G A C G T A C T G G T A C A G T C A G C T A C G T

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:2
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:CACGTGMNSC
CACGTGNC--
 T G A C T C G A G A T C C T A G A C G T A C T G G T A C A T C G T A C G T A G C
G T A C C T G A A G T C C T A G G C A T A C T G G T C A G A T C A C G T A C G T

MNT/MA0825.1/Jaspar

Match Rank:3
Score:0.89
Offset:-2
Orientation:forward strand
Alignment:--CACGTGMNSC
ACCACGTGCC--
 A C G T A C G T T G A C T C G A G A T C C T A G A C G T A C T G G T A C A T C G T A C G T A G C
C T G A T A G C G T A C C G T A A G T C C T A G A C G T A C T G T G A C G A T C A C G T A C G T

Mlxip/MA0622.1/Jaspar

Match Rank:4
Score:0.89
Offset:-1
Orientation:reverse strand
Alignment:-CACGTGMNSC
ACACGTGC---
 A C G T T G A C T C G A G A T C C T A G A C G T A C T G G T A C A T C G T A C G T A G C
G T C A A G T C C G T A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:5
Score:0.89
Offset:-2
Orientation:forward strand
Alignment:--CACGTGMNSC
KCCACGTGAC--
 A C G T A C G T T G A C T C G A G A T C C T A G A C G T A C T G G T A C A T C G T A C G T A G C
A C T G T G A C G T A C C G T A A G T C T A C G A C G T A C T G G T C A A G T C A C G T A C G T

BHLHE40/MA0464.2/Jaspar

Match Rank:6
Score:0.89
Offset:-2
Orientation:forward strand
Alignment:--CACGTGMNSC
ATCACGTGAC--
 A C G T A C G T T G A C T C G A G A T C C T A G A C G T A C T G G T A C A T C G T A C G T A G C
T G C A C A G T G T A C T G C A G A T C T C A G G A C T A C T G G T C A G A T C A C G T A C G T

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:7
Score:0.89
Offset:-2
Orientation:forward strand
Alignment:--CACGTGMNSC
NVCACGTG----
 A C G T A C G T T G A C T C G A G A T C C T A G A C G T A C T G G T A C A T C G T A C G T A G C
C G A T T G C A G T A C C G T A A G T C C T A G G A C T C A T G A C G T A C G T A C G T A C G T

MAX/MA0058.3/Jaspar

Match Rank:8
Score:0.88
Offset:-2
Orientation:forward strand
Alignment:--CACGTGMNSC
ACCACGTGCT--
 A C G T A C G T T G A C T C G A G A T C C T A G A C G T A C T G G T A C A T C G T A C G T A G C
T G C A T G A C G T A C C T G A A G T C T C A G G A C T A C T G A T G C G A C T A C G T A C G T

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:9
Score:0.88
Offset:-2
Orientation:forward strand
Alignment:--CACGTGMNSC
GHCACGTG----
 A C G T A C G T T G A C T C G A G A T C C T A G A C G T A C T G G T A C A T C G T A C G T A G C
C T A G G C A T G A T C C G T A A G T C T C A G G A C T C T A G A C G T A C G T A C G T A C G T

Id2/MA0617.1/Jaspar

Match Rank:10
Score:0.88
Offset:-1
Orientation:reverse strand
Alignment:-CACGTGMNSC
TCACGTGC---
 A C G T T G A C T C G A G A T C C T A G A C G T A C T G G T A C A T C G T A C G T A G C
G A C T A G T C C G T A A G T C A C T G A C G T A C T G A G T C A C G T A C G T A C G T