Information for 18-CTGCTAGCAAGCC (Motif 22)

A G T C A C G T A C T G A T G C G A C T C G T A A C T G A G T C C G T A C G T A A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C A C G T A C G T A C T G A G T C A C G T C G T A A T C G A G T C C G T A A C T G
p-value:1e-6
log p-value:-1.453e+01
Information Content per bp:1.928
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.44%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets38.0 +/- 19.7bp
Average Position of motif in Background37.1 +/- 20.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CTGCTAGCAAGCC-
CTGGCAGNCTGCCA
 A G T C A C G T A C T G A T G C G A C T C G T A A C T G A G T C C G T A C G T A A C T G A G T C A G T C A C G T
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CTGCTAGCAAGCC--
-TGGCACCATGCCAA
 A G T C A C G T A C T G A T G C G A C T C G T A A C T G A G T C C G T A C G T A A C T G A G T C A G T C A C G T A C G T
A C G T A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A

POL006.1_BREu/Jaspar

Match Rank:3
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CTGCTAGCAAGCC
-----AGCGCGCC
 A G T C A C G T A C T G A T G C G A C T C G T A A C T G A G T C C G T A C G T A A C T G A G T C A G T C
A C G T A C G T A C G T A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTGCTAGCAAGCC---
TTGGCANNNTGCCAAG
 A G T C A C G T A C T G A T G C G A C T C G T A A C T G A G T C C G T A C G T A A C T G A G T C A G T C A C G T A C G T A C G T
G A C T C A G T A C T G C T A G T G A C G C T A T A G C C G T A T A C G C G A T A C T G G A T C G T A C G T C A C T G A T C A G

STAT3/MA0144.2/Jaspar

Match Rank:5
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CTGCTAGCAAGCC
CTTCTGGGAAA--
 A G T C A C G T A C T G A T G C G A C T C G T A A C T G A G T C C G T A C G T A A C T G A G T C A G T C
A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A A C G T A C G T

PB0154.1_Osr1_2/Jaspar

Match Rank:6
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----CTGCTAGCAAGCC
NNNTTAGGTAGCNTNT-
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G A T G C G A C T C G T A A C T G A G T C C G T A C G T A A C T G A G T C A G T C
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T A C G T

PB0155.1_Osr2_2/Jaspar

Match Rank:7
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----CTGCTAGCAAGCC
NNTGTAGGTAGCANNT-
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G A T G C G A C T C G T A A C T G A G T C C G T A C G T A A C T G A G T C A G T C
A C T G C T A G C G A T C A T G A G C T C G T A C T A G A C T G C G A T C T G A T A C G A G T C C T G A C T G A C T A G G A C T A C G T

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:8
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CTGCTAGCAAGCC
NCTTCCNGGAAGNN
 A C G T A G T C A C G T A C T G A T G C G A C T C G T A A C T G A G T C C G T A C G T A A C T G A G T C A G T C
T C A G A G T C G A C T A C G T G T A C A G T C C G A T C T A G C A T G G T C A C T G A T C A G A G C T T A C G

Stat4/MA0518.1/Jaspar

Match Rank:9
Score:0.50
Offset:0
Orientation:forward strand
Alignment:CTGCTAGCAAGCC-
TTTCCAGGAAATGG
 A G T C A C G T A C T G A T G C G A C T C G T A A C T G A G T C C G T A C G T A A C T G A G T C A G T C A C G T
A G C T G C A T C A G T T G A C G A T C C T G A C T A G C T A G C G T A C G T A T C G A A G C T T A C G T C A G

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.50
Offset:8
Orientation:forward strand
Alignment:CTGCTAGCAAGCC
--------CAGCC
 A G T C A C G T A C T G A T G C G A C T C G T A A C T G A G T C C G T A C G T A A C T G A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C