Information for 7-GGAGAGCTCACAACGG (Motif 20)

C T A G A C T G G T C A A C T G G T C A A T C G G T A C A G C T A G T C T C G A G T A C C G T A T C G A G T A C C A T G A C T G
Reverse Opposite:
A G T C G T A C C A T G A C G T C G A T A C T G A C G T A C T G C T G A C A T G A T G C A C G T A G T C A C G T A G T C A G T C
p-value:1e-8
log p-value:-1.948e+01
Information Content per bp:1.737
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif6.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.5 +/- 26.0bp
Average Position of motif in Background61.0 +/- 11.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0052.1_Plagl1_1/Jaspar

Match Rank:1
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GGAGAGCTCACAACGG
NNNGGGGCGCCCCCNN---
 A C G T A C G T A C G T C T A G A C T G G T C A A C T G G T C A A T C G G T A C A G C T A G T C T C G A G T A C C G T A T C G A G T A C C A T G A C T G
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A A C G T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:2
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GGAGAGCTCACAACGG
CGAACAGTGCTCACTAT--
 A C G T A C G T A C G T C T A G A C T G G T C A A C T G G T C A A T C G G T A C A G C T A G T C T C G A G T A C C G T A T C G A G T A C C A T G A C T G
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T A C G T A C G T

RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:3
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GGAGAGCTCACAACGG
GGGRAARRGRMCAGMTG
 A C G T C T A G A C T G G T C A A C T G G T C A A T C G G T A C A G C T A G T C T C G A G T A C C G T A T C G A G T A C C A T G A C T G
C A T G A C T G C T A G T C G A T C G A T C G A T C G A T C A G T C A G T C A G T G A C T G A C C G T A A C T G T G C A C G A T A C T G

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GGAGAGCTCACAACGG
CGGAGC-----------
 A C G T C T A G A C T G G T C A A C T G G T C A A T C G G T A C A G C T A G T C T C G A G T A C C G T A T C G A G T A C C A T G A C T G
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:5
Score:0.51
Offset:8
Orientation:reverse strand
Alignment:GGAGAGCTCACAACGG
--------AACAAAGG
 C T A G A C T G G T C A A C T G G T C A A T C G G T A C A G C T A G T C T C G A G T A C C G T A T C G A G T A C C A T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G

TBX1/MA0805.1/Jaspar

Match Rank:6
Score:0.49
Offset:7
Orientation:reverse strand
Alignment:GGAGAGCTCACAACGG
-------TCACACCT-
 C T A G A C T G G T C A A C T G G T C A A T C G G T A C A G C T A G T C T C G A G T A C C G T A T C G A G T A C C A T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T A C G T

ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--GGAGAGCTCACAACGG--
AADGAGVCANYASTACAGNC
 A C G T A C G T C T A G A C T G G T C A A C T G G T C A A T C G G T A C A G C T A G T C T C G A G T A C C G T A T C G A G T A C C A T G A C T G A C G T A C G T
G C T A T C G A C G A T C T A G C T G A C A T G T A G C G T A C C T G A C A T G G A T C G C T A T A G C G A C T C T G A A T G C T G C A C T A G C T G A G A T C

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:8
Score:0.48
Offset:8
Orientation:reverse strand
Alignment:GGAGAGCTCACAACGG
--------RACAAWGG
 C T A G A C T G G T C A A C T G G T C A A T C G G T A C A G C T A G T C T C G A G T A C C G T A T C G A G T A C C A T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G

TBX15/MA0803.1/Jaspar

Match Rank:9
Score:0.48
Offset:7
Orientation:reverse strand
Alignment:GGAGAGCTCACAACGG
-------TCACACCT-
 C T A G A C T G G T C A A C T G G T C A A T C G G T A C A G C T A G T C T C G A G T A C C G T A T C G A G T A C C A T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T G A C T C G A A T G C T G C A A G T C G A T C G A C T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:10
Score:0.48
Offset:4
Orientation:forward strand
Alignment:GGAGAGCTCACAACGG---
----CTCACACAATGGCGC
 C T A G A C T G G T C A A C T G G T C A A T C G G T A C A G C T A G T C T C G A G T A C C G T A T C G A G T A C C A T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C