Information for 8-CGACGCCTGT (Motif 18)

T A G C A T C G C G T A A T G C A C T G A T G C A G T C A G C T A T C G A C G T
Reverse Opposite:
G T C A A T G C C T G A A C T G A T C G A G T C A T C G C G A T A T G C A C T G
p-value:1e-8
log p-value:-2.054e+01
Information Content per bp:1.849
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.44%
Number of Background Sequences with motif66.0
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets44.1 +/- 16.1bp
Average Position of motif in Background44.8 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PKNOX2/MA0783.1/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CGACGCCTGT--
TGACACCTGTCA
 T A G C A T C G C G T A A T G C A C T G A T G C A G T C A G C T A T C G A C G T A C G T A C G T
G A C T A C T G C T G A A G T C C T G A A T G C G T A C G C A T C T A G G A C T A T G C G C T A

PB0180.1_Sp4_2/Jaspar

Match Rank:2
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----CGACGCCTGT-
NNGGCCACGCCTTTN
 A C G T A C G T A C G T A C G T T A G C A T C G C G T A A T G C A C T G A T G C A G T C A G C T A T C G A C G T A C G T
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

PKNOX1/MA0782.1/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CGACGCCTGT--
TGACACCTGTCA
 T A G C A T C G C G T A A T G C A C T G A T G C A G T C A G C T A T C G A C G T A C G T A C G T
G C A T A T C G C G T A A G T C T C G A A T G C G T A C G A C T C A T G G A C T A T G C C T G A

PB0117.1_Eomes_2/Jaspar

Match Rank:4
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----CGACGCCTGT--
NNGGCGACACCTCNNN
 A C G T A C G T A C G T A C G T T A G C A T C G C G T A A T G C A C T G A T G C A G T C A G C T A T C G A C G T A C G T A C G T
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

ID4/MA0824.1/Jaspar

Match Rank:5
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CGACGCCTGT-
-TACACCTGTC
 T A G C A T C G C G T A A T G C A C T G A T G C A G T C A G C T A T C G A C G T A C G T
A C G T C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.64
Offset:5
Orientation:forward strand
Alignment:CGACGCCTGT-
-----GCTGTG
 T A G C A T C G C G T A A T G C A C T G A T G C A G T C A G C T A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

PB0047.1_Myf6_1/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CGACGCCTGT-----
CNGACACCTGTTCNNN
 A C G T T A G C A T C G C G T A A T G C A C T G A T G C A G T C A G C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T
T G A C C T A G T C A G T G C A A G T C C T G A T G A C A T G C C G A T C T A G A G C T A G C T T A G C G A C T A G C T A G T C

TGIF2/MA0797.1/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CGACGCCTGT--
TGACAGCTGTCA
 T A G C A T C G C G T A A T G C A C T G A T G C A G T C A G C T A T C G A C G T A C G T A C G T
G C A T T A C G C T G A G A T C C T G A A T C G G T A C G A C T C T A G G A C T G A T C C G T A

Zfx/MA0146.2/Jaspar

Match Rank:9
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CGACGCCTGT
GGGGCCGAGGCCTG-
 A C G T A C G T A C G T A C G T A C G T T A G C A T C G C G T A A T G C A C T G A T G C A G T C A G C T A T C G A C G T
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CGACGCCTGT
CNAGGCCT--
 T A G C A T C G C G T A A T G C A C T G A T G C A G T C A G C T A T C G A C G T
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T