Motif 16

Information for 14-GCGCGCCTAGGGC (Motif 16)

Reverse Opposite:

p-value:	1e-9
log p-value:	-2.154e+01
Information Content per bp:	1.774
Number of Target Sequences with motif	9.0
Percentage of Target Sequences with motif	1.00%
Number of Background Sequences with motif	20.5
Percentage of Background Sequences with motif	0.05%
Average Position of motif in Targets	52.6 +/- 31.7bp
Average Position of motif in Background	49.1 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)	0.3
Multiplicity (# of sites on avg that occur together)	1.00
Motif File:	file (matrix) reverse opposite
SVG Files for Logos:	forward logo reverse opposite

Matches to Known Motifs

TFAP2A/MA0003.3/Jaspar

Match Rank:	1
Score:	0.67
Offset:	3
Orientation:	reverse strand
Alignment:	GCGCGCCTAGGGC- ---NGCCTGAGGCN

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:	2
Score:	0.67
Offset:	3
Orientation:	reverse strand
Alignment:	GCGCGCCTAGGGC- ---TGCCTGAGGCN

PB0008.1_E2F2_1/Jaspar

Match Rank:	3
Score:	0.67
Offset:	-3
Orientation:	reverse strand
Alignment:	---GCGCGCCTAGGGC NTCGCGCGCCTTNNN-

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:	4
Score:	0.66
Offset:	3
Orientation:	reverse strand
Alignment:	GCGCGCCTAGGGC- ---NGCCTNAGGCN

PB0009.1_E2F3_1/Jaspar

Match Rank:	5
Score:	0.66
Offset:	-6
Orientation:	forward strand
Alignment:	------GCGCGCCTAGGGC ATAAGGGCGCGCGAT----

POL006.1_BREu/Jaspar

Match Rank:	6
Score:	0.65
Offset:	-1
Orientation:	forward strand
Alignment:	-GCGCGCCTAGGGC AGCGCGCC------

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:	7
Score:	0.64
Offset:	1
Orientation:	forward strand
Alignment:	GCGCGCCTAGGGC- -TGCCCTGAGGGCA

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:	8
Score:	0.63
Offset:	1
Orientation:	reverse strand
Alignment:	GCGCGCCTAGGGC- -TGCCCTNAGGGCA

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:	9
Score:	0.63
Offset:	1
Orientation:	reverse strand
Alignment:	GCGCGCCTAGGGC- -TGCCCNNAGGGCA

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:	10
Score:	0.61
Offset:	1
Orientation:	reverse strand
Alignment:	GCGCGCCTAGGGC--- -NTNGCCTCAGGCNNN