Information for 12-AACGAAACCTGCA (Motif 13)

C G T A C G T A A T G C A C T G G T C A G T C A C G T A A G T C A T G C A C G T A C T G A G T C G T C A
Reverse Opposite:
A C G T A C T G A G T C G T C A A T C G A C T G A C G T A C G T A C G T A G T C A T C G A C G T A C G T
p-value:1e-10
log p-value:-2.359e+01
Information Content per bp:1.917
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.8 +/- 19.9bp
Average Position of motif in Background27.1 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0035.1_Irf5_1/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----AACGAAACCTGCA
ATAAACCGAAACCAA--
 A C G T A C G T A C G T A C G T C G T A C G T A A T G C A C T G G T C A G T C A C G T A A G T C A T G C A C G T A C T G A G T C G T C A
C G T A C G A T C T G A C G T A C T G A G A T C G A T C C T A G C T G A C G T A C G T A T A G C G A T C C T G A T C G A A C G T A C G T

Hes2/MA0616.1/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AACGAAACCTGCA
TAACGACACGTGC-
 A C G T C G T A C G T A A T G C A C T G G T C A G T C A C G T A A G T C A T G C A C G T A C T G A G T C G T C A
A C G T C G T A C G T A T A G C A T C G C T G A G T A C C T G A G T A C C T A G A C G T C T A G G T A C A C G T

PB0034.1_Irf4_1/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AACGAAACCTGCA
CGTATCGAAACCAAA-
 A C G T A C G T A C G T C G T A C G T A A T G C A C T G G T C A G T C A C G T A A G T C A T G C A C G T A C T G A G T C G T C A
T G A C C T A G C G A T C G T A G A C T A G T C C T A G T C G A C G T A C G T A T A G C G A T C C T G A G T C A C G T A A C G T

PB0033.1_Irf3_1/Jaspar

Match Rank:4
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----AACGAAACCTGCA
GAGAACCGAAACTG---
 A C G T A C G T A C G T A C G T C G T A C G T A A T G C A C T G G T C A G T C A C G T A A G T C A T G C A C G T A C T G A G T C G T C A
A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G A C G T A C G T A C G T

PB0036.1_Irf6_1/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AACGAAACCTGCA-
CTGATCGAAACCAAAGT
 A C G T A C G T A C G T C G T A C G T A A T G C A C T G G T C A G T C A C G T A A G T C A T G C A C G T A C T G A G T C G T C A A C G T
G T A C C G A T C A T G C T G A G A C T G A T C C T A G T C G A C G T A C G T A T A G C A G T C T C G A T G C A C G T A C A T G C G A T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AACGAAACCTGCA
ACTGAAACCA---
 C G T A C G T A A T G C A C T G G T C A G T C A C G T A A G T C A T G C A C G T A C T G A G T C G T C A
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T A C G T

PB0037.1_Isgf3g_1/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----AACGAAACCTGCA
CAAAATCGAAACTAA--
 A C G T A C G T A C G T A C G T C G T A C G T A A T G C A C T G G T C A G T C A C G T A A G T C A T G C A C G T A C T G A G T C G T C A
T G A C C T G A C T G A C G T A G C T A G C A T A G T C C T A G G T C A C G T A G C T A T A G C G A C T C G T A G C T A A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:8
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:AACGAAACCTGCA
----NCACCTGTN
 C G T A C G T A A T G C A C T G G T C A G T C A C G T A A G T C A T G C A C G T A C T G A G T C G T C A
A C G T A C G T A C G T A C G T T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T

IRF9/MA0653.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AACGAAACCTGCA--
AACGAAACCGAAACT
 C G T A C G T A A T G C A C T G G T C A G T C A C G T A A G T C A T G C A C G T A C T G A G T C G T C A A C G T A C G T
G C T A G C T A G A T C C T A G T G C A C G T A G T C A T A G C G A T C C T A G G T C A G C T A C G T A T A G C G A C T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AACGAAACCTGCA-
--SNGCACCTGCHS
 C G T A C G T A A T G C A C T G G T C A G T C A C G T A A G T C A T G C A C G T A C T G A G T C G T C A A C G T
A C G T A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C