Information for 3-TGAGGGACCTGCCAGT (Motif 3)

C G A T C T A G C T G A C T A G T A C G C T A G T G C A G T A C G T A C C G A T A C T G A G T C G T A C C G T A A C T G C G A T
Reverse Opposite:
C G T A A G T C G C A T A C T G C T A G G T A C C G T A A C T G A C T G A C G T A G T C A G T C A G T C A G C T A G T C C G T A
p-value:1e-16
log p-value:-3.695e+01
Information Content per bp:1.759
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.3 +/- 28.9bp
Average Position of motif in Background21.4 +/- 0.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:1
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TGAGGGACCTGCCAGT
GGTTAGAGACCT------
 A C G T A C G T C G A T C T A G C T G A C T A G T A C G C T A G T G C A G T A C G T A C C G A T A C T G A G T C G T A C C G T A A C T G C G A T
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:2
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:TGAGGGACCTGCCAGT-----
-----NNNNTGCCAGTGATTG
 C G A T C T A G C T G A C T A G T A C G C T A G T G C A G T A C G T A C C G A T A C T G A G T C G T A C C G T A A C T G C G A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G

PH0140.1_Pknox1/Jaspar

Match Rank:3
Score:0.53
Offset:2
Orientation:forward strand
Alignment:TGAGGGACCTGCCAGT--
--AAAGACCTGTCAATCC
 C G A T C T A G C T G A C T A G T A C G C T A G T G C A G T A C G T A C C G A T A C T G A G T C G T A C C G T A A C T G C G A T A C G T A C G T
A C G T A C G T C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C

MF0001.1_ETS_class/Jaspar

Match Rank:4
Score:0.52
Offset:8
Orientation:reverse strand
Alignment:TGAGGGACCTGCCAGT
--------CTTCCGGT
 C G A T C T A G C T G A C T A G T A C G C T A G T G C A G T A C G T A C C G A T A C T G A G T C G T A C C G T A A C T G C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T G A C T G A T C G T A C A C T G A T C G G A C T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.52
Offset:2
Orientation:forward strand
Alignment:TGAGGGACCTGCCAGT
--SNGCACCTGCHS--
 C G A T C T A G C T G A C T A G T A C G C T A G T G C A G T A C G T A C C G A T A C T G A G T C G T A C C G T A A C T G C G A T
A C G T A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T

ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer

Match Rank:6
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:TGAGGGACCTGCCAGT-
-------ACTTCCGGTT
 C G A T C T A G C T G A C T A G T A C G C T A G T G C A G T A C G T A C C G A T A C T G A G T C G T A C C G T A A C T G C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G T C G C A T C G A T A G T C A G T C A C T G A T C G G A C T A G C T

GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer

Match Rank:7
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:TGAGGGACCTGCCAGT-
-------ACTTCCGGTN
 C G A T C T A G C T G A C T A G T A C G C T A G T G C A G T A C G T A C C G A T A C T G A G T C G T A C C G T A A C T G C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G T C G C A T G C A T A T G C A G T C A C T G A T C G A G C T A G C T

PH0141.1_Pknox2/Jaspar

Match Rank:8
Score:0.50
Offset:2
Orientation:forward strand
Alignment:TGAGGGACCTGCCAGT--
--AAGCACCTGTCAATAT
 C G A T C T A G C T G A C T A G T A C G C T A G T G C A G T A C G T A C C G A T A C T G A G T C G T A C C G T A A C T G C G A T A C G T A C G T
A C G T A C G T G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T

ELK1/MA0028.2/Jaspar

Match Rank:9
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:TGAGGGACCTGCCAGT
------NACTTCCGGT
 C G A T C T A G C T G A C T A G T A C G C T A G T G C A G T A C G T A C C G A T A C T G A G T C G T A C C G T A A C T G C G A T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C T C G A A G T C C G A T A C G T T G A C T G A C A C T G A T C G G A C T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:TGAGGGACCTGCCAGT-
-------ACTTCCTGTT
 C G A T C T A G C T G A C T A G T A C G C T A G T G C A G T A C G T A C C G A T A C T G A G T C G T A C C G T A A C T G C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T