Information for 7-TGACTATAAT (Motif 11)

A C G T A C T G C G T A A G T C C G A T C G T A A C G T C T G A C G T A C G A T
Reverse Opposite:
G C T A A C G T A G C T G T C A C G A T C G T A C T A G A C G T A G T C C G T A
p-value:1e-9
log p-value:-2.216e+01
Information Content per bp:1.862
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.34%
Number of Background Sequences with motif41.6
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets63.8 +/- 30.2bp
Average Position of motif in Background53.3 +/- 25.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0174.1_Sox30_2/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--TGACTATAAT----
TAAGATTATAATACGG
 A C G T A C G T A C G T A C T G C G T A A G T C C G A T C G T A A C G T C T G A C G T A C G A T A C G T A C G T A C G T A C G T
G A C T G T C A C G T A A C T G G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G C A T A G C T A C G T A C G

PB0079.1_Sry_1/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TGACTATAAT----
NANTATTATAATTNNN
 A C G T A C G T A C G T A C T G C G T A A G T C C G A T C G T A A C G T C T G A C G T A C G A T A C G T A C G T A C G T A C G T
A C T G G C T A G C T A G A C T C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T G T C A C G A T T G C A

PB0069.1_Sox21_1/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TGACTATAAT----
TTTAATTATAATTAAG
 A C G T A C G T A C G T A C T G C G T A A G T C C G A T C G T A A C G T C T G A C G T A C G A T A C G T A C G T A C G T A C G T
G A C T G C A T G A C T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C A T G

PB0064.1_Sox14_1/Jaspar

Match Rank:4
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TGACTATAAT----
NNTAATTATAATTNNN
 A C G T A C G T A C G T A C T G C G T A A G T C C G A T C G T A A C G T C T G A C G T A C G A T A C G T A C G T A C G T A C G T
C A T G G T C A G C A T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C T A G G T A C

Nr2e1/MA0676.1/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TGACTATAAT
TTGACTTTT--
 A C G T A C G T A C T G C G T A A G T C C G A T C G T A A C G T C T G A C G T A C G A T
C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TGACTATAAT
CATGAC------
 A C G T A C G T A C G T A C T G C G T A A G T C C G A T C G T A A C G T C T G A C G T A C G A T
T A G C T C G A A C G T C A T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TGACTATAAT
NCGTGACN-----
 A C G T A C G T A C G T A C G T A C T G C G T A A G T C C G A T C G T A A C G T C T G A C G T A C G A T
T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T A C G T A C G T A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TGACTATAAT
-GACAATGNN
 A C G T A C T G C G T A A G T C C G A T C G T A A C G T C T G A C G T A C G A T
A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

PH0017.1_Cux1_2/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TGACTATAAT--
TAGTGATCATCATTA
 A C G T A C G T A C G T A C G T A C T G C G T A A G T C C G A T C G T A A C G T C T G A C G T A C G A T A C G T A C G T
G A C T G C T A C A T G A G C T C A T G G C T A C G A T G A T C C G T A C A G T G A T C T C G A A G C T A C G T G C T A

PB0172.1_Sox1_2/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TGACTATAAT--
NNNTAACAATTATAN
 A C G T A C G T A C G T A C G T A C T G C G T A A G T C C G A T C G T A A C G T C T G A C G T A C G A T A C G T A C G T
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G