Information for 6-KCYCYYTASRGAC (Motif 5)

A C G T A G T C A G C T A T G C A G T C A G T C A G C T C G T A A T G C C T G A A C T G C G T A A G T C
Reverse Opposite:
C T A G A C G T A G T C A G C T A T C G A C G T C T G A C T A G C T A G A T C G C T G A C T A G T G C A
p-value:1e-13
log p-value:-3.031e+01
Information Content per bp:1.811
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.21%
Number of Background Sequences with motif13.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets57.2 +/- 20.7bp
Average Position of motif in Background48.7 +/- 19.3bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:1
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:KCYCYYTASRGAC-
--TCCCNNGGGACN
 A C G T A G T C A G C T A T G C A G T C A G T C A G C T C G T A A T G C C T G A A C T G C G T A A G T C A C G T
A C G T A C G T G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:2
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:KCYCYYTASRGAC--
---GGTTAGAGACCT
 A C G T A G T C A G C T A T G C A G T C A G T C A G C T C G T A A T G C C T G A A C T G C G T A A G T C A C G T A C G T
A C G T A C G T A C G T C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T

EBF1/MA0154.3/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:KCYCYYTASRGAC-
ATTCCCAAGGGAAT
 A C G T A G T C A G C T A T G C A G T C A G T C A G C T C G T A A T G C C T G A A C T G C G T A A G T C A C G T
C T G A A C G T G A C T A T G C A G T C A G T C G C T A C G T A T C A G T C A G C A T G C T G A G T C A G A C T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.55
Offset:-7
Orientation:forward strand
Alignment:-------KCYCYYTASRGAC
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G C T A T G C A G T C A G T C A G C T C G T A A T G C C T G A A C T G C G T A A G T C
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

PLAG1/MA0163.1/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:KCYCYYTASRGAC--
-CCCCCTTGGGCCCC
 A C G T A G T C A G C T A T G C A G T C A G T C A G C T C G T A A T G C C T G A A C T G C G T A A G T C A C G T A C G T
A C G T A G T C G T A C A G T C A G T C G A T C A C G T C G A T C A T G T C A G A T C G G T A C A G T C G A T C A G T C

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:KCYCYYTASRGAC-----
-CTACTTGGATACGGAAT
 A C G T A G T C A G C T A T G C A G T C A G T C A G C T C G T A A T G C C T G A A C T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A T G C A C G T T C G A A T G C C A G T G A C T T C A G A C T G C G T A A C G T C G T A G A T C T A C G T A C G C G T A C G T A G C A T

PB0054.1_Rfx3_1/Jaspar

Match Rank:7
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---KCYCYYTASRGAC-------
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T A C G T A G T C A G C T A T G C A G T C A G T C A G C T C G T A A T G C C T G A A C T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

CTCF/MA0139.1/Jaspar

Match Rank:8
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----KCYCYYTASRGAC--
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A G T C A G C T A T G C A G T C A G T C A G C T C G T A A T G C C T G A A C T G C G T A A G T C A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-KCYCYYTASRGAC
TTCCCCCTAC----
 A C G T A C G T A G T C A G C T A T G C A G T C A G T C A G C T C G T A A T G C C T G A A C T G C G T A A G T C
A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:KCYCYYTASRGAC----
-------CCAGACRSVB
 A C G T A G T C A G C T A T G C A G T C A G T C A G C T C G T A A T G C C T G A A C T G C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C