p-value: | 1e-7 |
log p-value: | -1.830e+01 |
Information Content per bp: | 1.788 |
Number of Target Sequences with motif | 12.0 |
Percentage of Target Sequences with motif | 1.58% |
Number of Background Sequences with motif | 79.3 |
Percentage of Background Sequences with motif | 0.17% |
Average Position of motif in Targets | 58.2 +/- 23.7bp |
Average Position of motif in Background | 52.4 +/- 28.5bp |
Strand Bias (log2 ratio + to - strand density) | -0.7 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 1 |
Score: | 0.61 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | CYKGCCAGCCAGG ----CCAGACAG- |
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Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 2 |
Score: | 0.61 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | CYKGCCAGCCAGG ----BCAGACWA- |
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NFIC/MA0161.1/Jaspar
Match Rank: | 3 |
Score: | 0.59 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | CYKGCCAGCCAGG ------TGCCAA- |
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NFIX/MA0671.1/Jaspar
Match Rank: | 4 |
Score: | 0.59 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | CYKGCCAGCCAGG ----CGTGCCAAG |
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POL010.1_DCE_S_III/Jaspar
Match Rank: | 5 |
Score: | 0.58 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | CYKGCCAGCCAGG -----CAGCC--- |
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Hand1::Tcf3/MA0092.1/Jaspar
Match Rank: | 6 |
Score: | 0.57 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | CYKGCCAGCCAGG-- -----ATGCCAGACN |
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Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 7 |
Score: | 0.57 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CYKGCCAGCCAGG TGGCAGNCTGCCAG- |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 8 |
Score: | 0.56 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | CYKGCCAGCCAGG- ----CCAGACRSVB |
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SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar
Match Rank: | 9 |
Score: | 0.55 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CYKGCCAGCCAGG AGGTGNCAGACAG- |
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Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer
Match Rank: | 10 |
Score: | 0.54 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | CYKGCCAGCCAGG------ ----SCAGYCADGCATGAC |
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