Information for 8-GAYAWGTTAC (Motif 23)

A C T G C G T A A G T C C G T A C G A T A C T G A C G T A C G T C G T A A G T C
Reverse Opposite:
C T A G A C G T C G T A C G T A G T A C C G T A A C G T C T A G A C G T A G T C
p-value:1e-8
log p-value:-2.036e+01
Information Content per bp:1.889
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.05%
Number of Background Sequences with motif19.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets38.8 +/- 24.1bp
Average Position of motif in Background53.6 +/- 22.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HLTF/MA0109.1/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GAYAWGTTAC
NNATAAGGNN-
 A C G T A C T G C G T A A G T C C G T A C G A T A C T G A C G T A C G T C G T A A G T C
C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T A C G T

Mecom/MA0029.1/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GAYAWGTTAC--
AAGATAAGATAACA
 A C G T A C G T A C T G C G T A A G T C C G T A C G A T A C T G A C G T A C G T C G T A A G T C A C G T A C G T
C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A

USF2/MA0526.1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GAYAWGTTAC-
GTCATGTGACC
 A C T G C G T A A G T C C G T A C G A T A C T G A C G T A C G T C G T A A G T C A C G T
T C A G A G C T A G T C C G T A A G C T A C T G A C G T A C T G T C G A A G T C G A T C

PH0085.1_Irx4/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GAYAWGTTAC---
AATATACATGTAAAACA
 A C G T A C G T A C G T A C G T A C T G C G T A A G T C C G T A C G A T A C T G A C G T A C G T C G T A A G T C A C G T A C G T A C G T
C G T A C G T A G C A T C T G A C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G T C A C G T A C G T A A G T C C G T A

HMBOX1/MA0895.1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GAYAWGTTAC-
-ACTAGTTAAC
 A C T G C G T A A G T C C G T A C G A T A C T G A C G T A C G T C G T A A G T C A C G T
A C G T T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GAYAWGTTAC
GKVTCADRTTWC
 A C G T A C G T A C T G C G T A A G T C C G T A C G A T A C T G A C G T A C G T C G T A A G T C
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C

PH0086.1_Irx5/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GAYAWGTTAC---
AATATACATGTAAAATT
 A C G T A C G T A C G T A C G T A C T G C G T A A G T C C G T A C G A T A C T G A C G T A C G T C G T A A G T C A C G T A C G T A C G T
C G A T C G T A C G A T G C T A C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A G T C A C G T A C G T A A C G T C G A T

USF1/MA0093.2/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GAYAWGTTAC-
GCCACGTGACC
 A C T G C G T A A G T C C G T A C G A T A C T G A C G T A C G T C G T A A G T C A C G T
T C A G A G T C G T A C C G T A A G T C T C A G A C G T A C T G C T G A A G T C G A T C

PH0084.1_Irx3_2/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GAYAWGTTAC---
AATATACATGTAATATA
 A C G T A C G T A C G T A C G T A C T G C G T A A G T C C G T A C G A T A C T G A C G T A C G T C G T A A G T C A C G T A C G T A C G T
C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T

PH0082.1_Irx2/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GAYAWGTTAC---
TAAATACATGTAAAATT
 A C G T A C G T A C G T A C G T A C T G C G T A A G T C C G T A C G A T A C T G A C G T A C G T C G T A A G T C A C G T A C G T A C G T
C G A T C G T A C G T A C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A C G T A C T G A C G T A A C G T G C A T