Information for 15-YCTCACTSGAGAGTGT (Motif 21)

A G C T A G T C C G A T A T G C T G C A A T G C A G C T A T G C A C T G C G T A A C T G C G T A A C T G A G C T C A T G C G A T
Reverse Opposite:
C G T A G T A C C T G A A G T C C G A T T A G C G C A T T A G C T A C G T C G A A T C G A C G T A T C G C G T A A C T G C T G A
p-value:1e-9
log p-value:-2.199e+01
Information Content per bp:1.718
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets36.6 +/- 22.7bp
Average Position of motif in Background67.0 +/- 17.2bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:1
Score:0.54
Offset:8
Orientation:forward strand
Alignment:YCTCACTSGAGAGTGT--
--------TTRAGTGSYK
 A G C T A G T C C G A T A T G C T G C A A T G C A G C T A T G C A C T G C G T A A C T G C G T A A C T G A G C T C A T G C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

SOX8/MA0868.1/Jaspar

Match Rank:2
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:YCTCACTSGAGAGTGT-
-AACACTGCACATTGTT
 A G C T A G T C C G A T A T G C T G C A A T G C A G C T A T G C A C T G C G T A A C T G C G T A A C T G A G C T C A T G C G A T A C G T
A C G T C T G A C G T A A G T C G T C A G T A C A C G T T A C G T G A C C G T A G A T C G T C A A C G T A G C T A C T G A C G T C G A T

PB0130.1_Gm397_2/Jaspar

Match Rank:3
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:YCTCACTSGAGAGTGT------
------NNGCGTGTGTGCNGCN
 A G C T A G T C C G A T A T G C T G C A A T G C A G C T A T G C A C T G C G T A A C T G C G T A A C T G A G C T C A T G C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

T/MA0009.2/Jaspar

Match Rank:4
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:YCTCACTSGAGAGTGT--
--TCACACCTAGGTGTGA
 A G C T A G T C C G A T A T G C T G C A A T G C A G C T A T G C A C T G C G T A A C T G C G T A A C T G A G C T C A T G C G A T A C G T A C G T
A C G T A C G T G A C T T G A C C T G A A G T C T C G A G A T C T G A C G A C T C G T A A C T G C T A G A G C T C T A G G A C T A C T G C T G A

SREBF1/MA0595.1/Jaspar

Match Rank:5
Score:0.49
Offset:1
Orientation:forward strand
Alignment:YCTCACTSGAGAGTGT
-ATCACCCCAC-----
 A G C T A G T C C G A T A T G C T G C A A T G C A G C T A T G C A C T G C G T A A C T G C G T A A C T G A G C T C A T G C G A T
A C G T T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C A C G T A C G T A C G T A C G T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:6
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:YCTCACTSGAGAGTGT-
--NNNACCGAGAGTNNN
 A G C T A G T C C G A T A T G C T G C A A T G C A G C T A T G C A C T G C G T A A C T G C G T A A C T G A G C T C A T G C G A T A C G T
A C G T A C G T A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

POL002.1_INR/Jaspar

Match Rank:7
Score:0.49
Offset:8
Orientation:reverse strand
Alignment:YCTCACTSGAGAGTGT
--------NNNANTGA
 A G C T A G T C C G A T A T G C T G C A A T G C A G C T A T G C A C T G C G T A A C T G C G T A A C T G A G C T C A T G C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A

Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer

Match Rank:8
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-YCTCACTSGAGAGTGT----
ANTTMRCASBNNNGTGYKAAN
 A C G T A G C T A G T C C G A T A T G C T G C A A T G C A G C T A T G C A C T G C G T A A C T G C G T A A C T G A G C T C A T G C G A T A C G T A C G T A C G T A C G T
C G T A C G A T G A C T G A C T T G A C C T G A A T G C C T G A T A G C A G T C A C G T T C G A C A T G T A C G G A C T A T C G G A C T A C G T C T G A T C G A C G T A

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.49
Offset:8
Orientation:reverse strand
Alignment:YCTCACTSGAGAGTGT--
--------TTGAGTGSTT
 A G C T A G T C C G A T A T G C T G C A A T G C A G C T A T G C A C T G C G T A A C T G C G T A A C T G A G C T C A T G C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

GFX(?)/Promoter/Homer

Match Rank:10
Score:0.48
Offset:2
Orientation:reverse strand
Alignment:YCTCACTSGAGAGTGT
--TCTCGCGAGAAT--
 A G C T A G T C C G A T A T G C T G C A A T G C A G C T A T G C A C T G C G T A A C T G C G T A A C T G A G C T C A T G C G A T
A C G T A C G T G A C T T G A C A C G T T A G C C A T G A G T C C A T G T C G A A C T G T C G A C T G A A G C T A C G T A C G T