Information for 7-ACTTCATTAG (Motif 19)

C T G A A G T C C G A T A C G T A G T C C G T A A G C T A C G T G T C A A C T G
Reverse Opposite:
A G T C C A G T C G T A C T G A A C G T A C T G C G T A C G T A A C T G A G C T
p-value:1e-9
log p-value:-2.208e+01
Information Content per bp:1.867
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.37%
Number of Background Sequences with motif158.5
Percentage of Background Sequences with motif0.34%
Average Position of motif in Targets49.1 +/- 26.0bp
Average Position of motif in Background52.4 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:ACTTCATTAG
GCTTCC----
 C T G A A G T C C G A T A C G T A G T C C G T A A G C T A C G T G T C A A C T G
A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T

LBX1/MA0618.1/Jaspar

Match Rank:2
Score:0.63
Offset:2
Orientation:forward strand
Alignment:ACTTCATTAG
--TTAATTAG
 C T G A A G T C C G A T A C G T A G T C C G T A A G C T A C G T G T C A A C T G
A C G T A C G T C G A T A G C T C G T A C G T A A G C T C G A T C T G A A T C G

LHX2/MA0700.1/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:ACTTCATTAG-
-NNTAATTAGN
 C T G A A G T C C G A T A C G T A G T C C G T A A G C T A C G T G T C A A C T G A C G T
A C G T T A C G G A C T G A C T T G C A C G T A A G C T C A G T C T G A T C A G A G C T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:ACTTCATTAG
ACGTCA----
 C T G A A G T C C G A T A C G T A G T C C G T A A G C T A C G T G T C A A C T G
C T G A A G T C T C A G A C G T G T A C C G T A A C G T A C G T A C G T A C G T

mix-a/MA0621.1/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:ACTTCATTAG-
AATTAATTAGT
 C T G A A G T C C G A T A C G T A G T C C G T A A G C T A C G T G T C A A C T G A C G T
C G T A C T G A G A C T A C G T C G T A C G T A A C G T A C G T C G T A C T A G A C G T

Atf1/MA0604.1/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-ACTTCATTAG
TACGTCAT---
 A C G T C T G A A G T C C G A T A C G T A G T C C G T A A G C T A C G T G T C A A C T G
A G C T C T G A A G T C A C T G A C G T T G A C C G T A A G C T A C G T A C G T A C G T

VAX2/MA0723.1/Jaspar

Match Rank:7
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:ACTTCATTAG
--NTAATTAG
 C T G A A G T C C G A T A C G T A G T C C G T A A G C T A C G T G T C A A C T G
A C G T A C G T T C A G G A C T G T C A G C T A C G A T C A G T C T G A T C A G

PH0143.1_Pou2f1/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-ACTTCATTAG-----
TACTTAATTAATNNAN
 A C G T C T G A A G T C C G A T A C G T A G T C C G T A A G C T A C G T G T C A A C T G A C G T A C G T A C G T A C G T A C G T
G C A T C G T A T G A C G A C T C G A T G T C A C G T A C G A T A C G T C G T A C G T A G A C T C G T A G A C T C T G A G A C T

PH0147.1_Pou3f2/Jaspar

Match Rank:9
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---ACTTCATTAG----
GATAATTAATTAGTTTG
 A C G T A C G T A C G T C T G A A G T C C G A T A C G T A G T C C G T A A G C T A C G T G T C A A C T G A C G T A C G T A C G T A C G T
T A C G C G A T C G A T C G T A G C T A G A C T A G C T G C T A C G T A C G A T A C G T G C T A C T A G A C G T C A G T G A C T C T A G

PH0152.1_Pou6f1_2/Jaspar

Match Rank:10
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---ACTTCATTAG----
GCAACCTCATTATNNNN
 A C G T A C G T A C G T C T G A A G T C C G A T A C G T A G T C C G T A A G C T A C G T G T C A A C T G A C G T A C G T A C G T A C G T
C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T