Information for 12-CAGAAGCCTAAGCGGA (Motif 18)

A G T C C G T A T A C G C G T A C T G A A T C G A G T C A T G C C G A T C G T A C G T A T A C G T G A C A C T G C T A G C G T A
Reverse Opposite:
A C G T A G T C A G T C A C T G A G T C A C G T A C G T C G T A A T C G A C T G A T G C A G C T A C G T A G T C A C G T C T A G
p-value:1e-10
log p-value:-2.309e+01
Information Content per bp:1.897
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.0 +/- 21.0bp
Average Position of motif in Background58.0 +/- 16.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0115.1_Nkx2-6/Jaspar

Match Rank:1
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:CAGAAGCCTAAGCGGA---
---AATNTTAAGTGGNTNN
 A G T C C G T A T A C G C G T A C T G A A T C G A G T C A T G C C G A T C G T A C G T A T A C G T G A C A C T G C T A G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C T G A C G A T A C T G G C A T A G C T C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T G C T A

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CAGAAGCCTAAGCGGA
-NGAAGC---------
 A G T C C G T A T A C G C G T A C T G A A T C G A G T C A T G C C G A T C G T A C G T A T A C G T G A C A C T G C T A G C G T A
A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0050.1_Osr1_1/Jaspar

Match Rank:3
Score:0.49
Offset:-5
Orientation:forward strand
Alignment:-----CAGAAGCCTAAGCGGA
ATTTACAGTAGCAAAA-----
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A T A C G C G T A C T G A A T C G A G T C A T G C C G A T C G T A C G T A T A C G T G A C A C T G C T A G C G T A
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A A C G T A C G T A C G T A C G T A C G T

BARHL2/MA0635.1/Jaspar

Match Rank:4
Score:0.49
Offset:6
Orientation:forward strand
Alignment:CAGAAGCCTAAGCGGA
------GCTAAACGGT
 A G T C C G T A T A C G C G T A C T G A A T C G A G T C A T G C C G A T C G T A C G T A T A C G T G A C A C T G C T A G C G T A
A C G T A C G T A C G T A C G T A C G T A C G T T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T

PLAG1/MA0163.1/Jaspar

Match Rank:5
Score:0.49
Offset:2
Orientation:forward strand
Alignment:CAGAAGCCTAAGCGGA
--GGGGCCCAAGGGGG
 A G T C C G T A T A C G C G T A C T G A A T C G A G T C A T G C C G A T C G T A C G T A T A C G T G A C A C T G C T A G C G T A
A C G T A C G T A C T G C T A G A C T G A C T G A T G C A G T C G T A C C G T A T G C A C A T G A C T G A C T G A C T G C T A G

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.48
Offset:5
Orientation:reverse strand
Alignment:CAGAAGCCTAAGCGGA-
-----GCCTCAGGGCAT
 A G T C C G T A T A C G C G T A C T G A A T C G A G T C A T G C C G A T C G T A C G T A T A C G T G A C A C T G C T A G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

PB0051.1_Osr2_1/Jaspar

Match Rank:7
Score:0.48
Offset:-5
Orientation:forward strand
Alignment:-----CAGAAGCCTAAGCGGA
ATGTACAGTAGCAAAG-----
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A T A C G C G T A C T G A A T C G A G T C A T G C C G A T C G T A C G T A T A C G T G A C A C T G C T A G C G T A
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G A C G T A C G T A C G T A C G T A C G T

SPIB/MA0081.1/Jaspar

Match Rank:8
Score:0.48
Offset:10
Orientation:forward strand
Alignment:CAGAAGCCTAAGCGGA-
----------AGAGGAA
 A G T C C G T A T A C G C G T A C T G A A T C G A G T C A T G C C G A T C G T A C G T A T A C G T G A C A C T G C T A G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A

Zfx/MA0146.2/Jaspar

Match Rank:9
Score:0.48
Offset:2
Orientation:reverse strand
Alignment:CAGAAGCCTAAGCGGA
--CAGGCCNNGGCCNN
 A G T C C G T A T A C G C G T A C T G A A T C G A G T C A T G C C G A T C G T A C G T A T A C G T G A C A C T G C T A G C G T A
A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.48
Offset:3
Orientation:forward strand
Alignment:CAGAAGCCTAAGCGGA
---AGGCCTNG-----
 A G T C C G T A T A C G C G T A C T G A A T C G A G T C A T G C C G A T C G T A C G T A T A C G T G A C A C T G C T A G C G T A
A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T A C G T A C G T