Information for 9-TGTTTGGCCAAGG (Motif 10)

C G A T A C T G A C G T C G A T G A C T A C T G A C T G A G T C A G T C C G T A C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A C G T A C T G A C T G A G T C A G T C C T G A C G T A C G T A A G T C C G T A
p-value:1e-11
log p-value:-2.544e+01
Information Content per bp:1.943
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.2 +/- 26.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL004.1_CCAAT-box/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGTTTGGCCAAGG
TGATTGGCTANN-
 C G A T A C T G A C G T C G A T G A C T A C T G A C T G A G T C A G T C C G T A C G T A A C T G A C T G
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:TGTTTGGCCAAGG
-----TGCCAA--
 C G A T A C T G A C G T C G A T G A C T A C T G A C T G A G T C A G T C C G T A C G T A A C T G A C T G
A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:3
Score:0.58
Offset:4
Orientation:forward strand
Alignment:TGTTTGGCCAAGG---
----AGGTCAAGGTCA
 C G A T A C T G A C G T C G A T G A C T A C T G A C T G A G T C A G T C C G T A C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TGTTTGGCCAAGG
---CGTGCCAAG-
 C G A T A C T G A C G T C G A T G A C T A C T G A C T G A G T C A G T C C G T A C G T A A C T G A C T G
A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:5
Score:0.57
Offset:6
Orientation:forward strand
Alignment:TGTTTGGCCAAGG---
------NTCAAGGTCA
 C G A T A C T G A C G T C G A T G A C T A C T G A C T G A G T C A G T C C G T A C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

PB0200.1_Zfp187_2/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TGTTTGGCCAAGG----
-NNAGGGACAAGGGCNC
 C G A T A C T G A C G T C G A T G A C T A C T G A C T G A G T C A G T C C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C

PB0121.1_Foxj3_2/Jaspar

Match Rank:7
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----TGTTTGGCCAAGG
NNCTTTGTTTTGNTNNN-
 A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C G T C G A T G A C T A C T G A C T G A G T C A G T C C G T A C G T A A C T G A C T G
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:8
Score:0.56
Offset:6
Orientation:forward strand
Alignment:TGTTTGGCCAAGG---
------BTCAAGGTCA
 C G A T A C T G A C G T C G A T G A C T A C T G A C T G A G T C A G T C C G T A C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:9
Score:0.56
Offset:4
Orientation:forward strand
Alignment:TGTTTGGCCAAGG---
----AGGTCAAGGTCA
 C G A T A C T G A C G T C G A T G A C T A C T G A C T G A G T C A G T C C G T A C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

NFYB/MA0502.1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TGTTTGGCCAAGG-
CTGATTGGTCNATTT
 A C G T C G A T A C T G A C G T C G A T G A C T A C T G A C T G A G T C A G T C C G T A C G T A A C T G A C T G A C G T
A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T