Information for 11-TRAAGWTSTGAAA (Motif 8)

A G C T C T G A G T C A C T G A C A T G G C A T C G A T A T C G C G A T C T A G C T G A T G C A C T G A
Reverse Opposite:
A G C T A C G T A G C T A G T C G C T A T A G C G C T A C G T A G T A C A G C T A C G T G A C T T C G A
p-value:1e-10
log p-value:-2.437e+01
Information Content per bp:1.616
Number of Target Sequences with motif53.0
Percentage of Target Sequences with motif6.13%
Number of Background Sequences with motif1024.5
Percentage of Background Sequences with motif2.15%
Average Position of motif in Targets50.6 +/- 28.5bp
Average Position of motif in Background49.4 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TBR1/MA0802.1/Jaspar

Match Rank:1
Score:0.66
Offset:3
Orientation:forward strand
Alignment:TRAAGWTSTGAAA
---AGGTGTGAAA
 A G C T C T G A G T C A C T G A C A T G G C A T C G A T A T C G C G A T C T A G C T G A T G C A C T G A
A C G T A C G T A C G T C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A

PB0013.1_Eomes_1/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TRAAGWTSTGAAA---
GAAAAGGTGTGAAAATT
 A C G T A G C T C T G A G T C A C T G A C A T G G C A T C G A T A T C G C G A T C T A G C T G A T G C A C T G A A C G T A C G T A C G T
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T

EOMES/MA0800.1/Jaspar

Match Rank:3
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TRAAGWTSTGAAA--
--AAGGTGTGAAAAT
 A G C T C T G A G T C A C T G A C A T G G C A T C G A T A T C G C G A T C T A G C T G A T G C A C T G A A C G T A C G T
A C G T A C G T C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T

TBX21/MA0690.1/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TRAAGWTSTGAAA
--AAGGTGTGAA-
 A G C T C T G A G T C A C T G A C A T G G C A T C G A T A T C G C G A T C T A G C T G A T G C A C T G A
A C G T A C G T C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A A C G T

PB0162.1_Sfpi1_2/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TRAAGWTSTGAAA--
-CAAATTCCGGAACC
 A G C T C T G A G T C A C T G A C A T G G C A T C G A T A T C G C G A T C T A G C T G A T G C A C T G A A C G T A C G T
A C G T G T A C G C T A C T G A G C T A G C A T C G A T G T A C T G A C T C A G T C A G C G T A G C T A G T A C G T A C

PB0148.1_Mtf1_2/Jaspar

Match Rank:6
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TRAAGWTSTGAAA----
---AAATAAGAAAAAAC
 A G C T C T G A G T C A C T G A C A T G G C A T C G A T A T C G C G A T C T A G C T G A T G C A C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C

TBX2/MA0688.1/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TRAAGWTSTGAAA
--AAGGTGTGAAA
 A G C T C T G A G T C A C T G A C A T G G C A T C G A T A T C G C G A T C T A G C T G A T G C A C T G A
A C G T A C G T C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A

TBX20/MA0689.1/Jaspar

Match Rank:8
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TRAAGWTSTGAAA
--TAGGTGTGAAG
 A G C T C T G A G T C A C T G A C A T G G C A T C G A T A T C G C G A T C T A G C T G A T G C A C T G A
A C G T A C G T C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:9
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TRAAGWTSTGAAA
--AAGGTGTKAA-
 A G C T C T G A G T C A C T G A C A T G G C A T C G A T A T C G C G A T C T A G C T G A T G C A C T G A
A C G T A C G T C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:10
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TRAAGWTSTGAAA
---AGGTGTGAAM
 A G C T C T G A G T C A C T G A C A T G G C A T C G A T A T C G C G A T C T A G C T G A T G C A C T G A
A C G T A C G T A C G T C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A