Information for 13-CTCTRARMCARTG (Motif 9)

A G T C A C G T A G T C C G A T C T A G C G T A T C A G G T C A A G T C C G T A T C A G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C A C G T A C T G A C G T A G T C A C G T A G T C C G T A A C T G C G T A A C T G
p-value:1e-8
log p-value:-2.011e+01
Information Content per bp:1.872
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif6.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.0 +/- 33.3bp
Average Position of motif in Background44.5 +/- 19.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox6/MA0515.1/Jaspar

Match Rank:1
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CTCTRARMCARTG-
----AAAACAATGG
 A G T C A C G T A G T C C G A T C T A G C G T A T C A G G T C A A G T C C G T A T C A G A C G T A C T G A C G T
A C G T A C G T A C G T A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G

PB0168.1_Sox14_2/Jaspar

Match Rank:2
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CTCTRARMCARTG----
--CTCACACAATGGCGC
 A G T C A C G T A G T C C G A T C T A G C G T A T C A G G T C A A G T C C G T A T C A G A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CTCTRARMCARTG-
----VRAACAATGG
 A G T C A C G T A G T C C G A T C T A G C G T A T C A G G T C A A G T C C G T A T C A G A C G T A C T G A C G T
A C G T A C G T A C G T A C G T T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G

Sox17/MA0078.1/Jaspar

Match Rank:4
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:CTCTRARMCARTG--
------GACAATGNN
 A G T C A C G T A G T C C G A T C T A G C G T A T C A G G T C A A G T C C G T A T C A G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:5
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CTCTRARMCARTG--
-----RAACAATGGN
 A G T C A C G T A G T C C G A T C T A G C G T A T C A G G T C A A G T C C G T A T C A G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:6
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CTCTRARMCARTG-
----VRRACAAWGG
 A G T C A C G T A G T C C G A T C T A G C G T A T C A G G T C A A G T C C G T A T C A G A C G T A C T G A C G T
A C G T A C G T A C G T A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G

POL004.1_CCAAT-box/Jaspar

Match Rank:7
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CTCTRARMCARTG-
--ACTAGCCAATCA
 A G T C A C G T A G T C C G A T C T A G C G T A T C A G G T C A A G T C C G T A T C A G A C G T A C T G A C G T
A C G T A C G T G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

SOX9/MA0077.1/Jaspar

Match Rank:8
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:CTCTRARMCARTG-
-----GAACAATGG
 A G T C A C G T A G T C C G A T C T A G C G T A T C A G G T C A A G T C C G T A T C A G A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G

SOX10/MA0442.1/Jaspar

Match Rank:9
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:CTCTRARMCARTG
-------ACAAAG
 A G T C A C G T A G T C C G A T C T A G C G T A T C A G G T C A A G T C C G T A T C A G A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G

NFY(CCAAT)/Promoter/Homer

Match Rank:10
Score:0.53
Offset:5
Orientation:forward strand
Alignment:CTCTRARMCARTG--
-----AGCCAATCGG
 A G T C A C G T A G T C C G A T C T A G C G T A T C A G G T C A A G T C C G T A T C A G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G