Information for 5-GCCCMAAAGCCAYATT (Motif 6)

A C T G A G T C G T A C T G A C G T C A T C G A G T C A C G T A C A T G A T G C A G T C C G T A G A C T C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T C T A G C G A T A C T G A T C G G A T C G A C T A C G T A G C T C A G T A C T G A C T G A C T G G T A C
p-value:1e-15
log p-value:-3.671e+01
Information Content per bp:1.733
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets63.2 +/- 23.5bp
Average Position of motif in Background74.7 +/- 6.7bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GCCCMAAAGCCAYATT-
-----GCNGCCATCTTG
 A C T G A G T C G T A C T G A C G T C A T C G A G T C A C G T A C A T G A T G C A G T C C G T A G A C T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

NOTO/MA0710.1/Jaspar

Match Rank:2
Score:0.54
Offset:9
Orientation:forward strand
Alignment:GCCCMAAAGCCAYATT---
---------GCTAATTAGC
 A C T G A G T C G T A C T G A C G T C A T C G A G T C A C G T A C A T G A T G C A G T C C G T A G A C T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G G A T C G C A T G T C A C G T A A C G T C A G T C T G A T C A G A T G C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.53
Offset:5
Orientation:forward strand
Alignment:GCCCMAAAGCCAYATT-
-----NWAACCACADNN
 A C T G A G T C G T A C T G A C G T C A T C G A G T C A C G T A C A T G A T G C A G T C C G T A G A C T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

PH0152.1_Pou6f1_2/Jaspar

Match Rank:4
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:GCCCMAAAGCCAYATT------
-----GCAACCTCATTATNNNN
 A C T G A G T C G T A C T G A C G T C A T C G A G T C A C G T A C A T G A T G C A G T C C G T A G A C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T

Neurog1/MA0623.1/Jaspar

Match Rank:5
Score:0.52
Offset:8
Orientation:reverse strand
Alignment:GCCCMAAAGCCAYATT--
--------ACCATATGGT
 A C T G A G T C G T A C T G A C G T C A T C G A G T C A C G T A C A T G A T G C A G T C C G T A G A C T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T G A C G T A C C T G A A C G T T G C A G A C T A C T G A T C G G A C T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:6
Score:0.52
Offset:6
Orientation:forward strand
Alignment:GCCCMAAAGCCAYATT
------AAACCACANN
 A C T G A G T C G T A C T G A C G T C A T C G A G T C A C G T A C A T G A T G C A G T C C G T A G A C T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

NEUROD2/MA0668.1/Jaspar

Match Rank:7
Score:0.52
Offset:8
Orientation:forward strand
Alignment:GCCCMAAAGCCAYATT--
--------GCCATATGGT
 A C T G A G T C G T A C T G A C G T C A T C G A G T C A C G T A C A T G A T G C A G T C C G T A G A C T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T G A C A T G C C T G A A G C T T G C A A G C T A C T G A C T G G A C T

POU6F2/MA0793.1/Jaspar

Match Rank:8
Score:0.51
Offset:8
Orientation:forward strand
Alignment:GCCCMAAAGCCAYATT--
--------AGCTCATTAT
 A C T G A G T C G T A C T G A C G T C A T C G A G T C A C G T A C A T G A T G C A G T C C G T A G A C T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T

PB0132.1_Hbp1_2/Jaspar

Match Rank:9
Score:0.51
Offset:6
Orientation:forward strand
Alignment:GCCCMAAAGCCAYATT-------
------TGTTCCCATTGTGTACT
 A C T G A G T C G T A C T G A C G T C A T C G A G T C A C G T A C A T G A T G C A G T C C G T A G A C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:10
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:GCCCMAAAGCCAYATT------
-----NNNACCTCATTATCNTN
 A C T G A G T C G T A C T G A C G T C A T C G A G T C A C G T A C A T G A T G C A G T C C G T A G A C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C