Information for 12-GCCCTTGCGC (Motif 19)

A C T G A T G C T A G C A G T C A G C T A G C T A C T G A G T C C T A G A G T C
Reverse Opposite:
T C A G G A T C A C T G T G A C C T G A C T G A C T A G A T C G A T C G A G T C
p-value:1e-8
log p-value:-1.873e+01
Information Content per bp:1.833
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.30%
Number of Background Sequences with motif205.1
Percentage of Background Sequences with motif0.46%
Average Position of motif in Targets54.5 +/- 28.0bp
Average Position of motif in Background48.3 +/- 35.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF1/MA0506.1/Jaspar

Match Rank:1
Score:0.76
Offset:0
Orientation:forward strand
Alignment:GCCCTTGCGC-
GCGCCTGCGCA
 A C T G A T G C T A G C A G T C A G C T A G C T A C T G A G T C C T A G A G T C A C G T
T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:GCCCTTGCGC--
GCGCATGCGCAG
 A C T G A T G C T A G C A G T C A G C T A G C T A C T G A G T C C T A G A G T C A C G T A C G T
T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G

NRF(NRF)/Promoter/Homer

Match Rank:3
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:GCCCTTGCGC--
GCGCATGCGCAC
 A C T G A T G C T A G C A G T C A G C T A G C T A C T G A G T C C T A G A G T C A C G T A C G T
A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C C T G A T A G C

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:4
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GCCCTTGCGC--
NTGCCCTTGGGCGN
 A C G T A C G T A C T G A T G C T A G C A G T C A G C T A G C T A C T G A G T C C T A G A G T C A C G T A C G T
G A T C G C A T T C A G G T A C G A T C G A T C C G A T G A C T C T A G C T A G C A T G A G T C C T A G T A C G

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:5
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---GCCCTTGCGC
BNTGDCCTTG---
 A C G T A C G T A C G T A C T G A T G C T A G C A G T C A G C T A G C T A C T G A G T C C T A G A G T C
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:6
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GCCCTTGCGC
TGACCTTGAN-
 A C G T A C T G A T G C T A G C A G T C A G C T A G C T A C T G A G T C C T A G A G T C
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:7
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GCCCTTGCGC--
GCTGACCTTGAACTN
 A C G T A C G T A C G T A C T G A T G C T A G C A G T C A G C T A G C T A C T G A G T C C T A G A G T C A C G T A C G T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GCCCTTGCGC
TGACCTTGAV-
 A C G T A C T G A T G C T A G C A G T C A G C T A G C T A C T G A G T C C T A G A G T C
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GCCCTTGCGC-
KGCCCTTCCCCA
 A C G T A C T G A T G C T A G C A G T C A G C T A G C T A C T G A G T C C T A G A G T C A C G T
C A G T C A T G G A T C G A T C G A T C G A C T A G C T T G A C G A T C G A T C G A T C C T G A

ETV6/MA0645.1/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GCCCTTGCGC-
-CACTTCCGCT
 A C T G A T G C T A G C A G T C A G C T A G C T A C T G A G T C C T A G A G T C A C G T
A C G T G A T C T C G A A G T C G C A T A G C T G T A C G T A C A C T G T A G C A C G T