Information for 9-SSCGCCMGGCTTTGRC (Motif 15)

T A G C A T C G A G T C A C T G A T G C A T G C T G C A A C T G C T A G A G T C G A C T A C G T A C G T C T A G T C G A A T G C
Reverse Opposite:
A T C G A G C T A G T C G T C A G T C A C T G A A C T G A G T C A G T C A C G T A T C G A T C G A G T C C T A G A T G C A T C G
p-value:1e-10
log p-value:-2.368e+01
Information Content per bp:1.729
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.15%
Number of Background Sequences with motif23.1
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets52.0 +/- 22.6bp
Average Position of motif in Background49.1 +/- 20.7bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:1
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:SSCGCCMGGCTTTGRC
------TGACCTTGAN
 T A G C A T C G A G T C A C T G A T G C A T G C T G C A A C T G C T A G A G T C G A C T A C G T A C G T C T A G T C G A A T G C
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

Nr5a2/MA0505.1/Jaspar

Match Rank:2
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:SSCGCCMGGCTTTGRC---
----GCTGACCTTGAACTN
 T A G C A T C G A G T C A C T G A T G C A T G C T G C A A C T G C T A G A G T C G A C T A C G T A C G T C T A G T C G A A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:3
Score:0.56
Offset:0
Orientation:forward strand
Alignment:SSCGCCMGGCTTTGRC
GGGGCTYGKCTGGGA-
 T A G C A T C G A G T C A C T G A T G C A T G C T G C A A C T G C T A G A G T C G A C T A C G T A C G T C T A G T C G A A T G C
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A A C G T

Zfx/MA0146.2/Jaspar

Match Rank:4
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:SSCGCCMGGCTTTGRC---
-----CAGGCCNNGGCCNN
 T A G C A T C G A G T C A C T G A T G C A T G C T G C A A C T G C T A G A G T C G A C T A C G T A C G T C T A G T C G A A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:5
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:SSCGCCMGGCTTTGRC
------TGACCTTGAV
 T A G C A T C G A G T C A C T G A T G C A T G C T G C A A C T G C T A G A G T C G A C T A C G T A C G T C T A G T C G A A T G C
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:6
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:SSCGCCMGGCTTTGRC
----CTAGGCCT----
 T A G C A T C G A G T C A C T G A T G C A T G C T G C A A C T G C T A G A G T C G A C T A C G T A C G T C T A G T C G A A T G C
A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--SSCGCCMGGCTTTGRC
AGCGCGCC----------
 A C G T A C G T T A G C A T C G A G T C A C T G A T G C A T G C T G C A A C T G C T A G A G T C G A C T A C G T A C G T C T A G T C G A A T G C
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:SSCGCCMGGCTTTGRC
----CNAGGCCT----
 T A G C A T C G A G T C A C T G A T G C A T G C T G C A A C T G C T A G A G T C G A C T A C G T A C G T C T A G T C G A A T G C
A C G T A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:SSCGCCMGGCTTTGRC
-ATGCCCGGGCATGT-
 T A G C A T C G A G T C A C T G A T G C A T G C T G C A A C T G C T A G A G T C G A C T A C G T A C G T C T A G T C G A A T G C
A C G T G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:10
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----SSCGCCMGGCTTTGRC
TACGCCCCGCCACTCTG----
 A C G T A C G T A C G T A C G T A C G T T A G C A T C G A G T C A C T G A T G C A T G C T G C A A C T G C T A G A G T C G A C T A C G T A C G T C T A G T C G A A T G C
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G A C G T A C G T A C G T A C G T