Information for 8-CTGCTGGSCAGCTGCS (Motif 13)

A T G C G C A T A C T G A G T C C G A T A C T G T A C G A T G C G T A C G C T A A C T G A T G C A G C T A T C G A T G C A T G C
Reverse Opposite:
A T C G T A C G A T G C T C G A T A C G A G T C C G A T A C T G A T C G A T G C A G T C C G T A A C T G T G A C C G T A A T C G
p-value:1e-10
log p-value:-2.456e+01
Information Content per bp:1.760
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.0 +/- 21.4bp
Average Position of motif in Background39.9 +/- 19.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NHLH1/MA0048.2/Jaspar

Match Rank:1
Score:0.65
Offset:6
Orientation:reverse strand
Alignment:CTGCTGGSCAGCTGCS
------CGCAGCTGCG
 A T G C G C A T A C T G A G T C C G A T A C T G T A C G A T G C G T A C G C T A A C T G A T G C A G C T A T C G A T G C A T G C
A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:2
Score:0.65
Offset:4
Orientation:forward strand
Alignment:CTGCTGGSCAGCTGCS
----NNVVCAGCTGBN
 A T G C G C A T A C T G A G T C C G A T A C T G T A C G A T G C G T A C G C T A A C T G A T G C A G C T A T C G A T G C A T G C
A C G T A C G T A C G T A C G T C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T

PB0003.1_Ascl2_1/Jaspar

Match Rank:3
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CTGCTGGSCAGCTGCS----
---CTCAGCAGCTGCTACTG
 A T G C G C A T A C T G A G T C C G A T A C T G T A C G A T G C G T A C G C T A A C T G A T G C A G C T A T C G A T G C A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:4
Score:0.63
Offset:7
Orientation:reverse strand
Alignment:CTGCTGGSCAGCTGCS-
-------GCAGCTGTNN
 A T G C G C A T A C T G A G T C C G A T A C T G T A C G A T G C G T A C G C T A A C T G A T G C A G C T A T C G A T G C A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:5
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:CTGCTGGSCAGCTGCS
-----NNVCAGCTGB-
 A T G C G C A T A C T G A G T C C G A T A C T G T A C G A T G C G T A C G C T A A C T G A T G C A G C T A T C G A T G C A T G C
A C G T A C G T A C G T A C G T A C G T C A T G T C A G T G A C G T A C G T C A T A C G T A G C G C A T T A C G A C T G A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:CTGCTGGSCAGCTGCS
-----CAGCAGCTGN-
 A T G C G C A T A C T G A G T C C G A T A C T G T A C G A T G C G T A C G C T A A C T G A T G C A G C T A T C G A T G C A T G C
A C G T A C G T A C G T A C G T A C G T T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T

Myog/MA0500.1/Jaspar

Match Rank:7
Score:0.62
Offset:6
Orientation:forward strand
Alignment:CTGCTGGSCAGCTGCS-
------GACAGCTGCAG
 A T G C G C A T A C T G A G T C C G A T A C T G T A C G A T G C G T A C G C T A A C T G A T G C A G C T A T C G A T G C A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:CTGCTGGSCAGCTGCS-
-----SDGCAGGTGCNS
 A T G C G C A T A C T G A G T C C G A T A C T G T A C G A T G C G T A C G C T A A C T G A T G C A G C T A T C G A T G C A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer

Match Rank:9
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----CTGCTGGSCAGCTGCS
NVCAKCTGGNNNCCAGMTGB-
 A C G T A C G T A C G T A C G T A C G T A T G C G C A T A C T G A G T C C G A T A C T G T A C G A T G C G T A C G C T A A C T G A T G C A G C T A T C G A T G C A T G C
T A C G T G A C T G A C C G T A A C T G T A G C C G A T A C T G A T C G A G C T A T G C T C G A T A G C G T A C C G T A A C T G T G A C G C A T A C T G A C T G A C G T

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:CTGCTGGSCAGCTGCS
-----NAACAGCTGT-
 A T G C G C A T A C T G A G T C C G A T A C T G T A C G A T G C G T A C G C T A A C T G A T G C A G C T A T C G A T G C A T G C
A C G T A C G T A C G T A C G T A C G T T C A G T G C A T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T