Information for 4-CCGATTGGCT (Motif 5)

T A G C A G T C A T C G C T G A C G A T A C G T A C T G A C T G A G T C A C G T
Reverse Opposite:
C G T A C T A G A G T C A G T C C G T A C G T A A G C T A T G C T C A G A T C G
p-value:1e-24
log p-value:-5.621e+01
Information Content per bp:1.853
Number of Target Sequences with motif47.0
Percentage of Target Sequences with motif5.01%
Number of Background Sequences with motif310.8
Percentage of Background Sequences with motif0.69%
Average Position of motif in Targets54.5 +/- 25.7bp
Average Position of motif in Background49.0 +/- 34.1bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.91
Offset:0
Orientation:reverse strand
Alignment:CCGATTGGCT
CCGATTGGCT
 T A G C A G T C A T C G C T G A C G A T A C G T A C T G A C T G A G T C A C G T
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T

POL004.1_CCAAT-box/Jaspar

Match Rank:2
Score:0.84
Offset:1
Orientation:reverse strand
Alignment:CCGATTGGCT---
-TGATTGGCTANN
 T A G C A G T C A T C G C T G A C G A T A C G T A C T G A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

NFYB/MA0502.1/Jaspar

Match Rank:3
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:CCGATTGGCT-----
CTGATTGGTCNATTT
 T A G C A G T C A T C G C T G A C G A T A C G T A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

NFYA/MA0060.2/Jaspar

Match Rank:4
Score:0.73
Offset:-6
Orientation:forward strand
Alignment:------CCGATTGGCT--
AGAGTGCTGATTGGTCCA
 A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C A T C G C T G A C G A T A C G T A C T G A C T G A G T C A C G T A C G T A C G T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.72
Offset:4
Orientation:forward strand
Alignment:CCGATTGGCT
----TTGGCA
 T A G C A G T C A T C G C T G A C G A T A C G T A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:CCGATTGGCT--
---NTTGGCANN
 T A G C A G T C A T C G C T G A C G A T A C G T A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.63
Offset:4
Orientation:forward strand
Alignment:CCGATTGGCT--
----TWGTCTGV
 T A G C A G T C A T C G C T G A C G A T A C G T A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

Dux/MA0611.1/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CCGATTGGCT
TTGATTGN--
 T A G C A G T C A T C G C T G A C G A T A C G T A C T G A C T G A G T C A C G T
G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CCGATTGGCT--
--NNTTGGCANN
 T A G C A G T C A T C G C T G A C G A T A C G T A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

PH0026.1_Duxbl/Jaspar

Match Rank:10
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----CCGATTGGCT--
NNNNGTTGATTGGGTCG
 A C G T A C G T A C G T A C G T A C G T T A G C A G T C A T C G C T G A C G A T A C G T A C T G A C T G A G T C A C G T A C G T A C G T
A T G C C G T A A G T C A G T C T C A G G A C T C G A T C T A G C T G A A C G T A C G T C T A G T C A G T C A G G A C T G A T C T C A G