Information for 8-TGTGTWAAGATCACTG (Motif 6)

G A C T C T A G C G A T C T A G C A G T C G T A C G T A C G T A A T C G C T G A A C G T A G T C G T C A G T A C C G A T A C T G
Reverse Opposite:
A G T C C G T A A C T G A C G T T C A G G T C A A G C T A T G C A C G T A C G T C G A T G T C A A G T C C G T A A G T C C G T A
p-value:1e-14
log p-value:-3.312e+01
Information Content per bp:1.729
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets35.7 +/- 17.4bp
Average Position of motif in Background24.0 +/- 3.3bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:1
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TGTGTWAAGATCACTG
NCWRWGTAAACANSV---
 A C G T A C G T G A C T C T A G C G A T C T A G C A G T C G T A C G T A C G T A A T C G C T G A A C G T A G T C G T C A G T A C C G A T A C T G
T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G A C G T A C G T A C G T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGTGTWAAGATCACTG
TATGTAAACANG----
 G A C T C T A G C G A T C T A G C A G T C G T A C G T A C G T A A T C G C T G A A C G T A G T C G T C A G T A C C G A T A C T G
G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G A C G T A C G T A C G T A C G T

FOXC1/MA0032.2/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TGTGTWAAGATCACTG
TATGTAAATAT-----
 G A C T C T A G C G A T C T A G C A G T C G T A C G T A C G T A A T C G C T G A A C G T A G T C G T C A G T A C C G A T A C T G
G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T A C G T A C G T A C G T A C G T A C G T

FOXB1/MA0845.1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TGTGTWAAGATCACTG
TATGTAAATAT-----
 G A C T C T A G C G A T C T A G C A G T C G T A C G T A C G T A A T C G C T G A A C G T A G T C G T C A G T A C C G A T A C T G
G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T A C G T A C G T A C G T A C G T A C G T

Foxa2/MA0047.2/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TGTGTWAAGATCACTG
NCTAAGTAAACA------
 A C G T A C G T G A C T C T A G C G A T C T A G C A G T C G T A C G T A C G T A A T C G C T G A A C G T A G T C G T C A G T A C C G A T A C T G
T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TGTGTWAAGATCACTG
CAAAGTAAACANNNN--
 A C G T G A C T C T A G C G A T C T A G C A G T C G T A C G T A C G T A A T C G C T G A A C G T A G T C G T C A G T A C C G A T A C T G
G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A A C G T A C G T

Tcf7/MA0769.1/Jaspar

Match Rank:7
Score:0.59
Offset:5
Orientation:forward strand
Alignment:TGTGTWAAGATCACTG-
-----AAAGATCAAAGG
 G A C T C T A G C G A T C T A G C A G T C G T A C G T A C G T A A T C G C T G A A C G T A G T C G T C A G T A C C G A T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----TGTGTWAAGATCACTG
NNNVCTGWGYAAACASN----
 A C G T A C G T A C G T A C G T A C G T G A C T C T A G C G A T C T A G C A G T C G T A C G T A C G T A A T C G C T G A A C G T A G T C G T C A G T A C C G A T A C T G
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A A C G T A C G T A C G T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TGTGTWAAGATCACTG
AAAGTAAACA------
 G A C T C T A G C G A T C T A G C A G T C G T A C G T A C G T A A T C G C T G A A C G T A G T C G T C A G T A C C G A T A C T G
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TGTGTWAAGATCACTG
AAAGTAAACA------
 G A C T C T A G C G A T C T A G C A G T C G T A C G T A C G T A A T C G C T G A A C G T A G T C G T C A G T A C C G A T A C T G
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T