Information for 16-GTAACATGCT (Motif 22)

A C T G A C G T C G T A C G T A A G T C C G T A A C G T A C T G A G T C A C G T
Reverse Opposite:
C G T A A C T G A G T C C G T A A C G T A C T G A C G T A C G T C G T A A G T C
p-value:1e-5
log p-value:-1.234e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.43%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.3 +/- 20.5bp
Average Position of motif in Background72.5 +/- 16.6bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GTAACATGCT--
GWAAYHTGABMC
 A C T G A C G T C G T A C G T A A G T C C G T A A C G T A C T G A G T C A C G T A C G T A C G T
A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

USF2/MA0526.1/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GTAACATGCT
GGTCACATGAC
 A C G T A C T G A C G T C G T A C G T A A G T C C G T A A C G T A C T G A G T C A C G T
C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GTAACATGCT
GTCACATGAY
 A C T G A C G T C G T A C G T A A G T C C G T A A C G T A C T G A G T C A C G T
T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C

USF1/MA0093.2/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GTAACATGCT
GGTCACGTGGC
 A C G T A C T G A C G T C G T A C G T A A G T C C G T A A C G T A C T G A G T C A C G T
C T A G C T A G G A C T A G T C C G T A A G T C T C A G C G A T A C T G T C A G A G T C

DMRT3/MA0610.1/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GTAACATGCT
AATGTATCAAT--
 A C G T A C G T A C G T A C T G A C G T C G T A C G T A A G T C C G T A A C G T A C T G A G T C A C G T
G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T A C G T A C G T

PH0085.1_Irx4/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GTAACATGCT----
NNTTTTACATGTANNNT
 A C G T A C G T A C G T A C T G A C G T C G T A C G T A A G T C C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
G C A T T A C G G C A T G C A T C A G T C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G A C T C G T A G C A T G C A T

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GTAACATGCT
GTCACGTGGT
 A C T G A C G T C G T A C G T A A G T C C G T A A C G T A C T G A G T C A C G T
T C A G A C G T A G T C T C G A A G T C T C A G G C A T C T A G C T A G A G C T

PB0206.1_Zic2_2/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GTAACATGCT------
-TCNCCTGCTGNGNNN
 A C T G A C G T C G T A C G T A A G T C C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:9
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GTAACATGCT----
----CCTGCTGAGH
 A C T G A C G T C G T A C G T A A G T C C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GTAACATGCT--
GWAAYHTGAKMC
 A C T G A C G T C G T A C G T A A G T C C G T A A C G T A C T G A G T C A C G T A C G T A C G T
C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C