Information for 18-ATAAAGGCHGAGG (Motif 21)

G C T A A G C T C T G A C G T A C G T A A C T G A C T G A T G C G A T C T C A G C T G A T A C G A T C G
Reverse Opposite:
A T G C A G T C A G C T A G T C C T A G A T C G A G T C G T A C C G A T A C G T A G C T C T G A C G A T
p-value:1e-6
log p-value:-1.523e+01
Information Content per bp:1.732
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif27.4
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets45.1 +/- 25.1bp
Average Position of motif in Background43.2 +/- 17.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox2/MA0143.3/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-ATAAAGGCHGAGG
AACAAAGG------
 A C G T G C T A A G C T C T G A C G T A C G T A A C T G A C T G A T G C G A T C T C A G C T G A T A C G A T C G
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-ATAAAGGCHGAGG
RACAAWGG------
 A C G T G C T A A G C T C T G A C G T A C G T A A C T G A C T G A T G C G A T C T C A G C T G A T A C G A T C G
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

POL012.1_TATA-Box/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--ATAAAGGCHGAGG
GTATAAAAGGCGGGG
 A C G T A C G T G C T A A G C T C T G A C G T A C G T A A C T G A C T G A T G C G A T C T C A G C T G A T A C G A T C G
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

TBP/MA0108.2/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--ATAAAGGCHGAGG
GTATAAAAGGCGGGG
 A C G T A C G T G C T A A G C T C T G A C G T A C G T A A C T G A C T G A T G C G A T C T C A G C T G A T A C G A T C G
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

Sox3/MA0514.1/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---ATAAAGGCHGAGG
AAAACAAAGG------
 A C G T A C G T A C G T G C T A A G C T C T G A C G T A C G T A A C T G A C T G A T G C G A T C T C A G C T G A T A C G A T C G
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

BARHL2/MA0635.1/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-ATAAAGGCHGAGG
GCTAAACGGT----
 A C G T G C T A A G C T C T G A C G T A C G T A A C T G A C T G A T G C G A T C T C A G C T G A T A C G A T C G
T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T A C G T A C G T A C G T A C G T

Barhl1/MA0877.1/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-ATAAAGGCHGAGG
GCTAATTGCT----
 A C G T G C T A A G C T C T G A C G T A C G T A A C T G A C T G A T G C G A T C T C A G C T G A T A C G A T C G
A T C G G A T C G C A T C G T A C T G A C G A T A G C T C T A G A T G C A G C T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:8
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---ATAAAGGCHGAGG
VRRACAAWGG------
 A C G T A C G T A C G T G C T A A G C T C T G A C G T A C G T A A C T G A C T G A T G C G A T C T C A G C T G A T A C G A T C G
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

CDX1/MA0878.1/Jaspar

Match Rank:9
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---ATAAAGGCHGAGG
GCAATAAAA-------
 A C G T A C G T A C G T G C T A A G C T C T G A C G T A C G T A A C T G A C T G A T G C G A T C T C A G C T G A T A C G A T C G
T C A G G A T C G T C A T C G A G C A T G C T A C G T A G C T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:10
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---ATAAAGGCHGAGG
GGAACAAAGR------
 A C G T A C G T A C G T G C T A A G C T C T G A C G T A C G T A A C T G A C T G A T G C G A T C T C A G C T G A T A C G A T C G
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T A C G T A C G T