Information for 17-CGACTGCCACCTA (Motif 18)

A G T C A C T G C G T A A G T C A C G T A C T G A G T C A G T C C G T A A G T C A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G A C T G A C G T A C T G A C T G A G T C C G T A A C T G A C G T A G T C A C T G
p-value:1e-8
log p-value:-1.999e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets30.5 +/- 16.2bp
Average Position of motif in Background53.5 +/- 16.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CGACTGCCACCTA
TGTCTGDCACCT-
 A G T C A C T G C G T A A G T C A C G T A C T G A G T C A G T C C G T A A G T C A G T C A C G T C G T A
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CGACTGCCACCTA
CTGTCTGTCACCT-
 A C G T A G T C A C T G C G T A A G T C A C G T A C T G A G T C A G T C C G T A A G T C A G T C A C G T C G T A
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:CGACTGCCACCTA
----TGACACCT-
 A G T C A C T G C G T A A G T C A C G T A C T G A G T C A G T C C G T A A G T C A G T C A C G T C G T A
A C G T A C G T A C G T A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:4
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CGACTGCCACCTA
CGACCAACTGCCATGC-
 A C G T A C G T A C G T A C G T A G T C A C T G C G T A A G T C A C G T A C T G A G T C A G T C C G T A A G T C A G T C A C G T C G T A
A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C A C G T

Myb/MA0100.2/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CGACTGCCACCTA
CCAACTGCCA----
 A C G T A G T C A C T G C G T A A G T C A C G T A C T G A G T C A G T C C G T A A G T C A G T C A C G T C G T A
A G T C G A T C C G T A C T G A A G T C C G A T A C T G G A T C G T A C G C T A A C G T A C G T A C G T A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CGACTGCCACCTA
CCAACTGCCA----
 A C G T A G T C A C T G C G T A A G T C A C G T A C T G A G T C A G T C C G T A A G T C A G T C A C G T C G T A
A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A A C G T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:7
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CGACTGCCACCTA
---ATGCCAACC-
 A G T C A C T G C G T A A G T C A C G T A C T G A G T C A G T C C G T A A G T C A G T C A C G T C G T A
A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CGACTGCCACCTA-------
ANAGTGCCACCTGGTGGCCA
 A G T C A C T G C G T A A G T C A C G T A C T G A G T C A G T C C G T A A G T C A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

TBX5/MA0807.1/Jaspar

Match Rank:9
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CGACTGCCACCTA
----TCACACCT-
 A G T C A C T G C G T A A G T C A C G T A C T G A G T C A G T C C G T A A G T C A G T C A C G T C G T A
A C G T A C G T A C G T A C G T G A C T T G A C T C G A A G T C T G C A G T A C A G T C G A C T A C G T

PH0164.1_Six4/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CGACTGCCACCTA---
ATAAATGACACCTATCA
 A C G T A G T C A C T G C G T A A G T C A C G T A C T G A G T C A G T C C G T A A G T C A G T C A C G T C G T A A C G T A C G T A C G T
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A